Gene : Eucgr.F00890 E. grandis v2.0
Defline:  (1 of 3) PTHR13554 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED Genomic Order:  798
Name:  ? Eucgr.F00890 Secondary Identifier:  ? PAC:32052660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00890 0.5kb upstream 0.5kb upstream 9272 true Chr06: 12745542-12754813 Eucalyptus grandis
Eucgr.F00890 0.5kb upstream 0.5kb upstream 500 false Chr06: 12745542-12746041 Eucalyptus grandis
Eucgr.F00890 0.5kb downstream 0.5kb downstream 9272 true Chr06: 12746042-12755313 Eucalyptus grandis
Eucgr.F00890 0.5kb downstream 0.5kb downstream 500 false Chr06: 12754814-12755313 Eucalyptus grandis
Eucgr.F00890 1.0kb upstream 1.0kb upstream 9772 true Chr06: 12745042-12754813 Eucalyptus grandis
Eucgr.F00890 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12745042-12746041 Eucalyptus grandis
Eucgr.F00890 1.0kb downstream 1.0kb downstream 9772 true Chr06: 12746042-12755813 Eucalyptus grandis
Eucgr.F00890 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12754814-12755813 Eucalyptus grandis
Eucgr.F00890 2.0kb upstream 2.0kb upstream 10772 true Chr06: 12744042-12754813 Eucalyptus grandis
Eucgr.F00890 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12744042-12746041 Eucalyptus grandis
Eucgr.F00890 2.0kb downstream 2.0kb downstream 10772 true Chr06: 12746042-12756813 Eucalyptus grandis
Eucgr.F00890 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12754814-12756813 Eucalyptus grandis
Eucgr.F00890 5.0kb upstream 5.0kb upstream 13772 true Chr06: 12741042-12754813 Eucalyptus grandis
Eucgr.F00890 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12741042-12746041 Eucalyptus grandis
Eucgr.F00890 5.0kb downstream 5.0kb downstream 13772 true Chr06: 12746042-12759813 Eucalyptus grandis
Eucgr.F00890 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12754814-12759813 Eucalyptus grandis
Eucgr.F00890 10.0kb upstream 10.0kb upstream 18772 true Chr06: 12736042-12754813 Eucalyptus grandis
Eucgr.F00890 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12736042-12746041 Eucalyptus grandis
Eucgr.F00890 10.0kb downstream 10.0kb downstream 18772 true Chr06: 12746042-12764813 Eucalyptus grandis
Eucgr.F00890 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12754814-12764813 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026278 5273 Angiosperm View MSA
124063424 5270 Rosid View MSA
123751908 5271 Pentapetalae View MSA
122789081 5272 Eudicot View MSA
121347320 5274 Embryophyte View MSA
123424656 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.27458 0.0 14.5124    
cufflinks 3.00115 0.0 8.37829    
cufflinks 3.15266 0.0 8.83791    
cufflinks 3.66388 0.0 10.9208    
cufflinks 6.84396 0.0 17.3546   High
cufflinks 3.54632 0.0 9.85177    

0 Strain