Gene : Eucgr.F00484 E. grandis v2.0
Defline:  (1 of 1) PTHR18866:SF106 - ACETYL-COA CARBOXYLASE 1 Genomic Order:  459
Name:  ? Eucgr.F00484 Secondary Identifier:  ? PAC:32057536
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1264 Eucalyptus grandis pathologic  
Egrandis PWY-4381 Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-7388 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00484 0.5kb upstream 0.5kb upstream 15920 true Chr06: 6895342-6911261 Eucalyptus grandis
Eucgr.F00484 0.5kb upstream 0.5kb upstream 500 false Chr06: 6895342-6895841 Eucalyptus grandis
Eucgr.F00484 0.5kb downstream 0.5kb downstream 15920 true Chr06: 6895842-6911761 Eucalyptus grandis
Eucgr.F00484 0.5kb downstream 0.5kb downstream 500 false Chr06: 6911262-6911761 Eucalyptus grandis
Eucgr.F00484 1.0kb upstream 1.0kb upstream 16420 true Chr06: 6894842-6911261 Eucalyptus grandis
Eucgr.F00484 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6894842-6895841 Eucalyptus grandis
Eucgr.F00484 1.0kb downstream 1.0kb downstream 16420 true Chr06: 6895842-6912261 Eucalyptus grandis
Eucgr.F00484 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6911262-6912261 Eucalyptus grandis
Eucgr.F00484 2.0kb upstream 2.0kb upstream 17420 true Chr06: 6893842-6911261 Eucalyptus grandis
Eucgr.F00484 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6893842-6895841 Eucalyptus grandis
Eucgr.F00484 2.0kb downstream 2.0kb downstream 17420 true Chr06: 6895842-6913261 Eucalyptus grandis
Eucgr.F00484 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6911262-6913261 Eucalyptus grandis
Eucgr.F00484 5.0kb upstream 5.0kb upstream 20420 true Chr06: 6890842-6911261 Eucalyptus grandis
Eucgr.F00484 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6890842-6895841 Eucalyptus grandis
Eucgr.F00484 5.0kb downstream 5.0kb downstream 20420 true Chr06: 6895842-6916261 Eucalyptus grandis
Eucgr.F00484 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6911262-6916261 Eucalyptus grandis
Eucgr.F00484 10.0kb upstream 10.0kb upstream 25420 true Chr06: 6885842-6911261 Eucalyptus grandis
Eucgr.F00484 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6885842-6895841 Eucalyptus grandis
Eucgr.F00484 10.0kb downstream 10.0kb downstream 25420 true Chr06: 6895842-6921261 Eucalyptus grandis
Eucgr.F00484 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6911262-6921261 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041353 5273 Angiosperm View MSA
124064007 5270 Rosid View MSA
123738277 5271 Pentapetalae View MSA
122788155 5272 Eudicot View MSA
121349093 5274 Embryophyte View MSA
123428824 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.99652 0.0 8.86974    
cufflinks 24.8696 0.0 58.6153   High
cufflinks 24.7042 0.0 58.4431   High
cufflinks 1.95789 0.0 4.48016   Low
cufflinks 5.6855 0.0 12.5731    
cufflinks 13.6927 0.0 30.8745    

0 Strain