Gene : Eucgr.F01457 E. grandis v2.0
Defline:  (1 of 1) PTHR21043:SF1 - PROTEIN IOJAP, CHLOROPLASTIC Genomic Order:  1239
Name:  ? Eucgr.F01457 Secondary Identifier:  ? PAC:32056438
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01457 0.5kb upstream 0.5kb upstream 5072 true Chr06: 19710268-19715339 Eucalyptus grandis
Eucgr.F01457 0.5kb upstream 0.5kb upstream 500 false Chr06: 19714840-19715339 Eucalyptus grandis
Eucgr.F01457 0.5kb downstream 0.5kb downstream 5072 true Chr06: 19709768-19714839 Eucalyptus grandis
Eucgr.F01457 0.5kb downstream 0.5kb downstream 500 false Chr06: 19709768-19710267 Eucalyptus grandis
Eucgr.F01457 1.0kb upstream 1.0kb upstream 5572 true Chr06: 19710268-19715839 Eucalyptus grandis
Eucgr.F01457 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19714840-19715839 Eucalyptus grandis
Eucgr.F01457 1.0kb downstream 1.0kb downstream 5572 true Chr06: 19709268-19714839 Eucalyptus grandis
Eucgr.F01457 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19709268-19710267 Eucalyptus grandis
Eucgr.F01457 2.0kb upstream 2.0kb upstream 6572 true Chr06: 19710268-19716839 Eucalyptus grandis
Eucgr.F01457 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19714840-19716839 Eucalyptus grandis
Eucgr.F01457 2.0kb downstream 2.0kb downstream 6572 true Chr06: 19708268-19714839 Eucalyptus grandis
Eucgr.F01457 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19708268-19710267 Eucalyptus grandis
Eucgr.F01457 5.0kb upstream 5.0kb upstream 9572 true Chr06: 19710268-19719839 Eucalyptus grandis
Eucgr.F01457 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19714840-19719839 Eucalyptus grandis
Eucgr.F01457 5.0kb downstream 5.0kb downstream 9572 true Chr06: 19705268-19714839 Eucalyptus grandis
Eucgr.F01457 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19705268-19710267 Eucalyptus grandis
Eucgr.F01457 10.0kb upstream 10.0kb upstream 14572 true Chr06: 19710268-19724839 Eucalyptus grandis
Eucgr.F01457 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19714840-19724839 Eucalyptus grandis
Eucgr.F01457 10.0kb downstream 10.0kb downstream 14572 true Chr06: 19700268-19714839 Eucalyptus grandis
Eucgr.F01457 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19700268-19710267 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067704 5270 Rosid View MSA
123743843 5271 Pentapetalae View MSA
122785584 5272 Eudicot View MSA
122043136 5273 Angiosperm View MSA
121343948 5274 Embryophyte View MSA
123426763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.0643 0.0 62.6688 High  
cufflinks 10.9292 0.0 25.9046    
cufflinks 16.8238 0.0 38.6112    
cufflinks 5.71552 0.0 14.4702   Low
cufflinks 16.4311 0.0 37.7701    
cufflinks 44.4966 0.0 98.4452 High High

0 Strain