Gene : Eucgr.F01440 E. grandis v2.0
Defline:  (1 of 3) PTHR11538//PTHR11538:SF43 - PHENYLALANYL-TRNA SYNTHETASE Genomic Order:  1223
Name:  ? Eucgr.F01440 Secondary Identifier:  ? PAC:32053552
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01440 0.5kb upstream 0.5kb upstream 3081 true Chr06: 19594564-19597644 Eucalyptus grandis
Eucgr.F01440 0.5kb upstream 0.5kb upstream 500 false Chr06: 19597145-19597644 Eucalyptus grandis
Eucgr.F01440 0.5kb downstream 0.5kb downstream 3081 true Chr06: 19594064-19597144 Eucalyptus grandis
Eucgr.F01440 0.5kb downstream 0.5kb downstream 500 false Chr06: 19594064-19594563 Eucalyptus grandis
Eucgr.F01440 1.0kb upstream 1.0kb upstream 3581 true Chr06: 19594564-19598144 Eucalyptus grandis
Eucgr.F01440 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19597145-19598144 Eucalyptus grandis
Eucgr.F01440 1.0kb downstream 1.0kb downstream 3581 true Chr06: 19593564-19597144 Eucalyptus grandis
Eucgr.F01440 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19593564-19594563 Eucalyptus grandis
Eucgr.F01440 2.0kb upstream 2.0kb upstream 4581 true Chr06: 19594564-19599144 Eucalyptus grandis
Eucgr.F01440 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19597145-19599144 Eucalyptus grandis
Eucgr.F01440 2.0kb downstream 2.0kb downstream 4581 true Chr06: 19592564-19597144 Eucalyptus grandis
Eucgr.F01440 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19592564-19594563 Eucalyptus grandis
Eucgr.F01440 5.0kb upstream 5.0kb upstream 7581 true Chr06: 19594564-19602144 Eucalyptus grandis
Eucgr.F01440 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19597145-19602144 Eucalyptus grandis
Eucgr.F01440 5.0kb downstream 5.0kb downstream 7581 true Chr06: 19589564-19597144 Eucalyptus grandis
Eucgr.F01440 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19589564-19594563 Eucalyptus grandis
Eucgr.F01440 10.0kb upstream 10.0kb upstream 12581 true Chr06: 19594564-19607144 Eucalyptus grandis
Eucgr.F01440 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19597145-19607144 Eucalyptus grandis
Eucgr.F01440 10.0kb downstream 10.0kb downstream 12581 true Chr06: 19584564-19597144 Eucalyptus grandis
Eucgr.F01440 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19584564-19594563 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029703 5273 Angiosperm View MSA
124074900 5270 Rosid View MSA
123750465 5271 Pentapetalae View MSA
122797518 5272 Eudicot View MSA
121349631 5274 Embryophyte View MSA
123425246 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.570581 0.0 2.40743    
cufflinks 1.11613 0.0 3.7807    
cufflinks 3.45455 0.0 10.1792   High
cufflinks 0.97427 0.0 3.4392    
cufflinks 1.17229 0.0 4.86116    
cufflinks 0.590786 0.0 2.19634 Low  

0 Strain