Gene : Eucgr.F01414 E. grandis v2.0
Defline:  (1 of 1) KOG1871//KOG1873 - Ubiquitin-specific protease // Ubiquitin-specific protease Genomic Order:  1204
Name:  ? Eucgr.F01414 Secondary Identifier:  ? PAC:32057660
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01414 0.5kb upstream 0.5kb upstream 7677 true Chr06: 19345835-19353511 Eucalyptus grandis
Eucgr.F01414 0.5kb upstream 0.5kb upstream 500 false Chr06: 19345835-19346334 Eucalyptus grandis
Eucgr.F01414 0.5kb downstream 0.5kb downstream 7677 true Chr06: 19346335-19354011 Eucalyptus grandis
Eucgr.F01414 0.5kb downstream 0.5kb downstream 500 false Chr06: 19353512-19354011 Eucalyptus grandis
Eucgr.F01414 1.0kb upstream 1.0kb upstream 8177 true Chr06: 19345335-19353511 Eucalyptus grandis
Eucgr.F01414 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19345335-19346334 Eucalyptus grandis
Eucgr.F01414 1.0kb downstream 1.0kb downstream 8177 true Chr06: 19346335-19354511 Eucalyptus grandis
Eucgr.F01414 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19353512-19354511 Eucalyptus grandis
Eucgr.F01414 2.0kb upstream 2.0kb upstream 9177 true Chr06: 19344335-19353511 Eucalyptus grandis
Eucgr.F01414 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19344335-19346334 Eucalyptus grandis
Eucgr.F01414 2.0kb downstream 2.0kb downstream 9177 true Chr06: 19346335-19355511 Eucalyptus grandis
Eucgr.F01414 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19353512-19355511 Eucalyptus grandis
Eucgr.F01414 5.0kb upstream 5.0kb upstream 12177 true Chr06: 19341335-19353511 Eucalyptus grandis
Eucgr.F01414 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19341335-19346334 Eucalyptus grandis
Eucgr.F01414 5.0kb downstream 5.0kb downstream 12177 true Chr06: 19346335-19358511 Eucalyptus grandis
Eucgr.F01414 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19353512-19358511 Eucalyptus grandis
Eucgr.F01414 10.0kb upstream 10.0kb upstream 17177 true Chr06: 19336335-19353511 Eucalyptus grandis
Eucgr.F01414 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19336335-19346334 Eucalyptus grandis
Eucgr.F01414 10.0kb downstream 10.0kb downstream 17177 true Chr06: 19346335-19363511 Eucalyptus grandis
Eucgr.F01414 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19353512-19363511 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067125 5270 Rosid View MSA
123746951 5271 Pentapetalae View MSA
122790465 5272 Eudicot View MSA
122045970 5273 Angiosperm View MSA
121346163 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.31232 0.0 22.4853    
cufflinks 14.8668 0.0 37.7339    
cufflinks 13.4798 0.0 32.1722    
cufflinks 22.2965 0.0 69.0313   High
cufflinks 14.2573 0.0 34.742    
cufflinks 7.25852 0.0 16.9215   Low

0 Strain