Gene : Eucgr.F01375 E. grandis v2.0
Defline:  (1 of 1) PTHR10173:SF38 - PEPTIDE METHIONINE SULFOXIDE REDUCTASE B1, CHLOROPLASTIC Genomic Order:  1170
Name:  ? Eucgr.F01375 Secondary Identifier:  ? PAC:32055945
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01375 0.5kb upstream 0.5kb upstream 2400 true Chr06: 18848629-18851028 Eucalyptus grandis
Eucgr.F01375 0.5kb upstream 0.5kb upstream 500 false Chr06: 18848629-18849128 Eucalyptus grandis
Eucgr.F01375 0.5kb downstream 0.5kb downstream 2400 true Chr06: 18849129-18851528 Eucalyptus grandis
Eucgr.F01375 0.5kb downstream 0.5kb downstream 500 false Chr06: 18851029-18851528 Eucalyptus grandis
Eucgr.F01375 1.0kb upstream 1.0kb upstream 2900 true Chr06: 18848129-18851028 Eucalyptus grandis
Eucgr.F01375 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18848129-18849128 Eucalyptus grandis
Eucgr.F01375 1.0kb downstream 1.0kb downstream 2900 true Chr06: 18849129-18852028 Eucalyptus grandis
Eucgr.F01375 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18851029-18852028 Eucalyptus grandis
Eucgr.F01375 2.0kb upstream 2.0kb upstream 3900 true Chr06: 18847129-18851028 Eucalyptus grandis
Eucgr.F01375 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18847129-18849128 Eucalyptus grandis
Eucgr.F01375 2.0kb downstream 2.0kb downstream 3900 true Chr06: 18849129-18853028 Eucalyptus grandis
Eucgr.F01375 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18851029-18853028 Eucalyptus grandis
Eucgr.F01375 5.0kb upstream 5.0kb upstream 6900 true Chr06: 18844129-18851028 Eucalyptus grandis
Eucgr.F01375 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18844129-18849128 Eucalyptus grandis
Eucgr.F01375 5.0kb downstream 5.0kb downstream 6900 true Chr06: 18849129-18856028 Eucalyptus grandis
Eucgr.F01375 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18851029-18856028 Eucalyptus grandis
Eucgr.F01375 10.0kb upstream 10.0kb upstream 11900 true Chr06: 18839129-18851028 Eucalyptus grandis
Eucgr.F01375 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18839129-18849128 Eucalyptus grandis
Eucgr.F01375 10.0kb downstream 10.0kb downstream 11900 true Chr06: 18849129-18861028 Eucalyptus grandis
Eucgr.F01375 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18851029-18861028 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067665 5270 Rosid View MSA
123746660 5271 Pentapetalae View MSA
122792336 5272 Eudicot View MSA
122047974 5273 Angiosperm View MSA
121348855 5274 Embryophyte View MSA
123426618 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.6082 0.0 107.064 High  
cufflinks 11.4609 0.0 27.7819    
cufflinks 33.255 0.0 76.6456 High  
cufflinks 23.1175 0.0 54.5963    
cufflinks 9.23992 0.0 23.2907   Low
cufflinks 77.0927 0.0 192.011 High High

0 Strain