Gene : Eucgr.F01371 E. grandis v2.0
Defline:  (1 of 2) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 Genomic Order:  1166
Name:  ? Eucgr.F01371 Secondary Identifier:  ? PAC:32055869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01371 0.5kb upstream 0.5kb upstream 3992 true Chr06: 18827028-18831019 Eucalyptus grandis
Eucgr.F01371 0.5kb upstream 0.5kb upstream 500 false Chr06: 18827028-18827527 Eucalyptus grandis
Eucgr.F01371 0.5kb downstream 0.5kb downstream 3992 true Chr06: 18827528-18831519 Eucalyptus grandis
Eucgr.F01371 0.5kb downstream 0.5kb downstream 500 false Chr06: 18831020-18831519 Eucalyptus grandis
Eucgr.F01371 1.0kb upstream 1.0kb upstream 4492 true Chr06: 18826528-18831019 Eucalyptus grandis
Eucgr.F01371 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18826528-18827527 Eucalyptus grandis
Eucgr.F01371 1.0kb downstream 1.0kb downstream 4492 true Chr06: 18827528-18832019 Eucalyptus grandis
Eucgr.F01371 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18831020-18832019 Eucalyptus grandis
Eucgr.F01371 2.0kb upstream 2.0kb upstream 5492 true Chr06: 18825528-18831019 Eucalyptus grandis
Eucgr.F01371 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18825528-18827527 Eucalyptus grandis
Eucgr.F01371 2.0kb downstream 2.0kb downstream 5492 true Chr06: 18827528-18833019 Eucalyptus grandis
Eucgr.F01371 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18831020-18833019 Eucalyptus grandis
Eucgr.F01371 5.0kb upstream 5.0kb upstream 8492 true Chr06: 18822528-18831019 Eucalyptus grandis
Eucgr.F01371 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18822528-18827527 Eucalyptus grandis
Eucgr.F01371 5.0kb downstream 5.0kb downstream 8492 true Chr06: 18827528-18836019 Eucalyptus grandis
Eucgr.F01371 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18831020-18836019 Eucalyptus grandis
Eucgr.F01371 10.0kb upstream 10.0kb upstream 13492 true Chr06: 18817528-18831019 Eucalyptus grandis
Eucgr.F01371 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18817528-18827527 Eucalyptus grandis
Eucgr.F01371 10.0kb downstream 10.0kb downstream 13492 true Chr06: 18827528-18841019 Eucalyptus grandis
Eucgr.F01371 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18831020-18841019 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072962 5270 Rosid View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.53985 0.0 5.06589   Low
cufflinks 3.6563 0.0 9.82948    
cufflinks 2.90887 0.0 8.1334    
cufflinks 3.3754 0.0 11.5204    
cufflinks 2.98024 0.0 8.32551    
cufflinks 8.33533 0.0 27.8209   High

0 Strain