Gene : Eucgr.F01241 E. grandis v2.0
Defline:  (1 of 15) PTHR10209:SF211 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  1088
Name:  ? Eucgr.F01241 Secondary Identifier:  ? PAC:32055010
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01241 0.5kb upstream 0.5kb upstream 1969 true Chr06: 16544342-16546310 Eucalyptus grandis
Eucgr.F01241 0.5kb upstream 0.5kb upstream 500 false Chr06: 16545811-16546310 Eucalyptus grandis
Eucgr.F01241 0.5kb downstream 0.5kb downstream 1969 true Chr06: 16543842-16545810 Eucalyptus grandis
Eucgr.F01241 0.5kb downstream 0.5kb downstream 500 false Chr06: 16543842-16544341 Eucalyptus grandis
Eucgr.F01241 1.0kb upstream 1.0kb upstream 2469 true Chr06: 16544342-16546810 Eucalyptus grandis
Eucgr.F01241 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16545811-16546810 Eucalyptus grandis
Eucgr.F01241 1.0kb downstream 1.0kb downstream 2469 true Chr06: 16543342-16545810 Eucalyptus grandis
Eucgr.F01241 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16543342-16544341 Eucalyptus grandis
Eucgr.F01241 2.0kb upstream 2.0kb upstream 3469 true Chr06: 16544342-16547810 Eucalyptus grandis
Eucgr.F01241 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16545811-16547810 Eucalyptus grandis
Eucgr.F01241 2.0kb downstream 2.0kb downstream 3469 true Chr06: 16542342-16545810 Eucalyptus grandis
Eucgr.F01241 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16542342-16544341 Eucalyptus grandis
Eucgr.F01241 5.0kb upstream 5.0kb upstream 6469 true Chr06: 16544342-16550810 Eucalyptus grandis
Eucgr.F01241 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16545811-16550810 Eucalyptus grandis
Eucgr.F01241 5.0kb downstream 5.0kb downstream 6469 true Chr06: 16539342-16545810 Eucalyptus grandis
Eucgr.F01241 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16539342-16544341 Eucalyptus grandis
Eucgr.F01241 10.0kb upstream 10.0kb upstream 11469 true Chr06: 16544342-16555810 Eucalyptus grandis
Eucgr.F01241 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16545811-16555810 Eucalyptus grandis
Eucgr.F01241 10.0kb downstream 10.0kb downstream 11469 true Chr06: 16534342-16545810 Eucalyptus grandis
Eucgr.F01241 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16534342-16544341 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051666 5270 Rosid View MSA
123752676 5271 Pentapetalae View MSA
122774719 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.833187 0.0 2.68241 Low  
cufflinks 0.420292 0.0 1.49251   Low
cufflinks 0.799821 0.0 2.60131    
cufflinks 0.597972 0.0 2.02435 Low  
cufflinks 0.899306 0.0 2.89223    

0 Strain