Gene : Eucgr.F01210 E. grandis v2.0
Defline:  (1 of 1) PTHR11088:SF31 - TRNA DIMETHYLALLYLTRANSFERASE 9 Genomic Order:  1060
Name:  ? Eucgr.F01210 Secondary Identifier:  ? PAC:32055706
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2781 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01210 0.5kb upstream 0.5kb upstream 5959 true Chr06: 16259885-16265843 Eucalyptus grandis
Eucgr.F01210 0.5kb upstream 0.5kb upstream 500 false Chr06: 16265344-16265843 Eucalyptus grandis
Eucgr.F01210 0.5kb downstream 0.5kb downstream 5959 true Chr06: 16259385-16265343 Eucalyptus grandis
Eucgr.F01210 0.5kb downstream 0.5kb downstream 500 false Chr06: 16259385-16259884 Eucalyptus grandis
Eucgr.F01210 1.0kb upstream 1.0kb upstream 6459 true Chr06: 16259885-16266343 Eucalyptus grandis
Eucgr.F01210 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16265344-16266343 Eucalyptus grandis
Eucgr.F01210 1.0kb downstream 1.0kb downstream 6459 true Chr06: 16258885-16265343 Eucalyptus grandis
Eucgr.F01210 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16258885-16259884 Eucalyptus grandis
Eucgr.F01210 2.0kb upstream 2.0kb upstream 7459 true Chr06: 16259885-16267343 Eucalyptus grandis
Eucgr.F01210 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16265344-16267343 Eucalyptus grandis
Eucgr.F01210 2.0kb downstream 2.0kb downstream 7459 true Chr06: 16257885-16265343 Eucalyptus grandis
Eucgr.F01210 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16257885-16259884 Eucalyptus grandis
Eucgr.F01210 5.0kb upstream 5.0kb upstream 10459 true Chr06: 16259885-16270343 Eucalyptus grandis
Eucgr.F01210 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16265344-16270343 Eucalyptus grandis
Eucgr.F01210 5.0kb downstream 5.0kb downstream 10459 true Chr06: 16254885-16265343 Eucalyptus grandis
Eucgr.F01210 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16254885-16259884 Eucalyptus grandis
Eucgr.F01210 10.0kb upstream 10.0kb upstream 15459 true Chr06: 16259885-16275343 Eucalyptus grandis
Eucgr.F01210 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16265344-16275343 Eucalyptus grandis
Eucgr.F01210 10.0kb downstream 10.0kb downstream 15459 true Chr06: 16249885-16265343 Eucalyptus grandis
Eucgr.F01210 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16249885-16259884 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066214 5270 Rosid View MSA
123738978 5271 Pentapetalae View MSA
122792264 5272 Eudicot View MSA
122047791 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.86577 0.0 18.2209    
cufflinks 6.32904 0.0 14.8609   Low
cufflinks 8.13121 0.0 18.747    
cufflinks 9.35543 0.0 21.315    
cufflinks 8.34103 0.0 19.2114    
cufflinks 14.8204 0.0 33.1157   High

0 Strain