Gene : Eucgr.F01145 E. grandis v2.0
Defline:  (1 of 3) PTHR32219:SF2 - PROTON PUMP-INTERACTOR 1-RELATED Genomic Order:  1000
Name:  ? Eucgr.F01145 Secondary Identifier:  ? PAC:32057745
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01145 0.5kb upstream 0.5kb upstream 5049 true Chr06: 15698799-15703847 Eucalyptus grandis
Eucgr.F01145 0.5kb upstream 0.5kb upstream 500 false Chr06: 15698799-15699298 Eucalyptus grandis
Eucgr.F01145 0.5kb downstream 0.5kb downstream 5049 true Chr06: 15699299-15704347 Eucalyptus grandis
Eucgr.F01145 0.5kb downstream 0.5kb downstream 500 false Chr06: 15703848-15704347 Eucalyptus grandis
Eucgr.F01145 1.0kb upstream 1.0kb upstream 5549 true Chr06: 15698299-15703847 Eucalyptus grandis
Eucgr.F01145 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15698299-15699298 Eucalyptus grandis
Eucgr.F01145 1.0kb downstream 1.0kb downstream 5549 true Chr06: 15699299-15704847 Eucalyptus grandis
Eucgr.F01145 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15703848-15704847 Eucalyptus grandis
Eucgr.F01145 2.0kb upstream 2.0kb upstream 6549 true Chr06: 15697299-15703847 Eucalyptus grandis
Eucgr.F01145 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15697299-15699298 Eucalyptus grandis
Eucgr.F01145 2.0kb downstream 2.0kb downstream 6549 true Chr06: 15699299-15705847 Eucalyptus grandis
Eucgr.F01145 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15703848-15705847 Eucalyptus grandis
Eucgr.F01145 5.0kb upstream 5.0kb upstream 9549 true Chr06: 15694299-15703847 Eucalyptus grandis
Eucgr.F01145 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15694299-15699298 Eucalyptus grandis
Eucgr.F01145 5.0kb downstream 5.0kb downstream 9549 true Chr06: 15699299-15708847 Eucalyptus grandis
Eucgr.F01145 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15703848-15708847 Eucalyptus grandis
Eucgr.F01145 10.0kb upstream 10.0kb upstream 14549 true Chr06: 15689299-15703847 Eucalyptus grandis
Eucgr.F01145 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15689299-15699298 Eucalyptus grandis
Eucgr.F01145 10.0kb downstream 10.0kb downstream 14549 true Chr06: 15699299-15713847 Eucalyptus grandis
Eucgr.F01145 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15703848-15713847 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070239 5270 Rosid View MSA
123743643 5271 Pentapetalae View MSA
122791245 5272 Eudicot View MSA
122042021 5273 Angiosperm View MSA
121350876 5274 Embryophyte View MSA
123428188 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.121953 0.0 0.433068 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain