Gene : Eucgr.F01085 E. grandis v2.0
Defline:  (1 of 1) PTHR10742:SF210 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Genomic Order:  948
Name:  ? Eucgr.F01085 Secondary Identifier:  ? PAC:32055857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6441 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01085 0.5kb upstream 0.5kb upstream 3500 true Chr06: 14931247-14934746 Eucalyptus grandis
Eucgr.F01085 0.5kb upstream 0.5kb upstream 500 false Chr06: 14934247-14934746 Eucalyptus grandis
Eucgr.F01085 0.5kb downstream 0.5kb downstream 3500 true Chr06: 14930747-14934246 Eucalyptus grandis
Eucgr.F01085 0.5kb downstream 0.5kb downstream 500 false Chr06: 14930747-14931246 Eucalyptus grandis
Eucgr.F01085 1.0kb upstream 1.0kb upstream 4000 true Chr06: 14931247-14935246 Eucalyptus grandis
Eucgr.F01085 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14934247-14935246 Eucalyptus grandis
Eucgr.F01085 1.0kb downstream 1.0kb downstream 4000 true Chr06: 14930247-14934246 Eucalyptus grandis
Eucgr.F01085 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14930247-14931246 Eucalyptus grandis
Eucgr.F01085 2.0kb upstream 2.0kb upstream 5000 true Chr06: 14931247-14936246 Eucalyptus grandis
Eucgr.F01085 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14934247-14936246 Eucalyptus grandis
Eucgr.F01085 2.0kb downstream 2.0kb downstream 5000 true Chr06: 14929247-14934246 Eucalyptus grandis
Eucgr.F01085 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14929247-14931246 Eucalyptus grandis
Eucgr.F01085 5.0kb upstream 5.0kb upstream 8000 true Chr06: 14931247-14939246 Eucalyptus grandis
Eucgr.F01085 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14934247-14939246 Eucalyptus grandis
Eucgr.F01085 5.0kb downstream 5.0kb downstream 8000 true Chr06: 14926247-14934246 Eucalyptus grandis
Eucgr.F01085 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14926247-14931246 Eucalyptus grandis
Eucgr.F01085 10.0kb upstream 10.0kb upstream 13000 true Chr06: 14931247-14944246 Eucalyptus grandis
Eucgr.F01085 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14934247-14944246 Eucalyptus grandis
Eucgr.F01085 10.0kb downstream 10.0kb downstream 13000 true Chr06: 14921247-14934246 Eucalyptus grandis
Eucgr.F01085 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14921247-14931246 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065563 5270 Rosid View MSA
123738735 5271 Pentapetalae View MSA
122791879 5272 Eudicot View MSA
122041755 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.23045 0.0 5.61357    
cufflinks 1.03953 0.0 2.79601   Low
cufflinks 2.85247 0.0 6.95957    
cufflinks 2.16612 0.0 5.39831    
cufflinks 1.03907 0.0 2.8061   Low
cufflinks 3.0709 0.0 7.51996   High

0 Strain