Gene : Eucgr.F01076 E. grandis v2.0
Defline:  (1 of 2) PTHR10139 - DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A Genomic Order:  939
Name:  ? Eucgr.F01076 Secondary Identifier:  ? PAC:32055405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01076 0.5kb upstream 0.5kb upstream 6505 true Chr06: 14866271-14872775 Eucalyptus grandis
Eucgr.F01076 0.5kb upstream 0.5kb upstream 500 false Chr06: 14866271-14866770 Eucalyptus grandis
Eucgr.F01076 0.5kb downstream 0.5kb downstream 6505 true Chr06: 14866771-14873275 Eucalyptus grandis
Eucgr.F01076 0.5kb downstream 0.5kb downstream 500 false Chr06: 14872776-14873275 Eucalyptus grandis
Eucgr.F01076 1.0kb upstream 1.0kb upstream 7005 true Chr06: 14865771-14872775 Eucalyptus grandis
Eucgr.F01076 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14865771-14866770 Eucalyptus grandis
Eucgr.F01076 1.0kb downstream 1.0kb downstream 7005 true Chr06: 14866771-14873775 Eucalyptus grandis
Eucgr.F01076 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14872776-14873775 Eucalyptus grandis
Eucgr.F01076 2.0kb upstream 2.0kb upstream 8005 true Chr06: 14864771-14872775 Eucalyptus grandis
Eucgr.F01076 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14864771-14866770 Eucalyptus grandis
Eucgr.F01076 2.0kb downstream 2.0kb downstream 8005 true Chr06: 14866771-14874775 Eucalyptus grandis
Eucgr.F01076 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14872776-14874775 Eucalyptus grandis
Eucgr.F01076 5.0kb upstream 5.0kb upstream 11005 true Chr06: 14861771-14872775 Eucalyptus grandis
Eucgr.F01076 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14861771-14866770 Eucalyptus grandis
Eucgr.F01076 5.0kb downstream 5.0kb downstream 11005 true Chr06: 14866771-14877775 Eucalyptus grandis
Eucgr.F01076 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14872776-14877775 Eucalyptus grandis
Eucgr.F01076 10.0kb upstream 10.0kb upstream 16005 true Chr06: 14856771-14872775 Eucalyptus grandis
Eucgr.F01076 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14856771-14866770 Eucalyptus grandis
Eucgr.F01076 10.0kb downstream 10.0kb downstream 16005 true Chr06: 14866771-14882775 Eucalyptus grandis
Eucgr.F01076 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14872776-14882775 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066590 5270 Rosid View MSA
123740797 5271 Pentapetalae View MSA
122791229 5272 Eudicot View MSA
122042843 5273 Angiosperm View MSA
121346679 5274 Embryophyte View MSA
123424970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.07659 0.0 16.3977    
cufflinks 3.10244 0.0 7.93324   Low
cufflinks 9.13707 0.0 21.6279   High
cufflinks 3.67542 0.0 9.164    
cufflinks 5.51886 0.0 13.0057    
cufflinks 4.55103 0.0 11.1709    

0 Strain