Gene : Eucgr.F01857 E. grandis v2.0
Defline:  (1 of 1) PTHR13878:SF60 - CYTOKININ DEHYDROGENASE 5 Genomic Order:  1735
Name:  ? Eucgr.F01857 Secondary Identifier:  ? PAC:32056310
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01857 0.5kb upstream 0.5kb upstream 6842 true Chr06: 28214924-28221765 Eucalyptus grandis
Eucgr.F01857 0.5kb upstream 0.5kb upstream 500 false Chr06: 28214924-28215423 Eucalyptus grandis
Eucgr.F01857 0.5kb downstream 0.5kb downstream 6842 true Chr06: 28215424-28222265 Eucalyptus grandis
Eucgr.F01857 0.5kb downstream 0.5kb downstream 500 false Chr06: 28221766-28222265 Eucalyptus grandis
Eucgr.F01857 1.0kb upstream 1.0kb upstream 7342 true Chr06: 28214424-28221765 Eucalyptus grandis
Eucgr.F01857 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28214424-28215423 Eucalyptus grandis
Eucgr.F01857 1.0kb downstream 1.0kb downstream 7342 true Chr06: 28215424-28222765 Eucalyptus grandis
Eucgr.F01857 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28221766-28222765 Eucalyptus grandis
Eucgr.F01857 2.0kb upstream 2.0kb upstream 8342 true Chr06: 28213424-28221765 Eucalyptus grandis
Eucgr.F01857 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28213424-28215423 Eucalyptus grandis
Eucgr.F01857 2.0kb downstream 2.0kb downstream 8342 true Chr06: 28215424-28223765 Eucalyptus grandis
Eucgr.F01857 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28221766-28223765 Eucalyptus grandis
Eucgr.F01857 5.0kb upstream 5.0kb upstream 11342 true Chr06: 28210424-28221765 Eucalyptus grandis
Eucgr.F01857 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28210424-28215423 Eucalyptus grandis
Eucgr.F01857 5.0kb downstream 5.0kb downstream 11342 true Chr06: 28215424-28226765 Eucalyptus grandis
Eucgr.F01857 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28221766-28226765 Eucalyptus grandis
Eucgr.F01857 10.0kb upstream 10.0kb upstream 16342 true Chr06: 28205424-28221765 Eucalyptus grandis
Eucgr.F01857 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28205424-28215423 Eucalyptus grandis
Eucgr.F01857 10.0kb downstream 10.0kb downstream 16342 true Chr06: 28215424-28231765 Eucalyptus grandis
Eucgr.F01857 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28221766-28231765 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065162 5270 Rosid View MSA
123739641 5271 Pentapetalae View MSA
122791542 5272 Eudicot View MSA
122043536 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.38114 0.0 8.40139   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.6988 0.0 24.1862    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 13.374 0.0 29.8158    

0 Strain