Gene : Eucgr.F01780 E. grandis v2.0
Defline:  (1 of 2) PTHR10796 - PATCHED-RELATED Genomic Order:  1530
Name:  ? Eucgr.F01780 Secondary Identifier:  ? PAC:32055269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01780 0.5kb upstream 0.5kb upstream 20651 true Chr06: 24035477-24056127 Eucalyptus grandis
Eucgr.F01780 0.5kb upstream 0.5kb upstream 500 false Chr06: 24055628-24056127 Eucalyptus grandis
Eucgr.F01780 0.5kb downstream 0.5kb downstream 20651 true Chr06: 24034977-24055627 Eucalyptus grandis
Eucgr.F01780 0.5kb downstream 0.5kb downstream 500 false Chr06: 24034977-24035476 Eucalyptus grandis
Eucgr.F01780 1.0kb upstream 1.0kb upstream 21151 true Chr06: 24035477-24056627 Eucalyptus grandis
Eucgr.F01780 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24055628-24056627 Eucalyptus grandis
Eucgr.F01780 1.0kb downstream 1.0kb downstream 21151 true Chr06: 24034477-24055627 Eucalyptus grandis
Eucgr.F01780 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24034477-24035476 Eucalyptus grandis
Eucgr.F01780 2.0kb upstream 2.0kb upstream 22151 true Chr06: 24035477-24057627 Eucalyptus grandis
Eucgr.F01780 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24055628-24057627 Eucalyptus grandis
Eucgr.F01780 2.0kb downstream 2.0kb downstream 22151 true Chr06: 24033477-24055627 Eucalyptus grandis
Eucgr.F01780 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24033477-24035476 Eucalyptus grandis
Eucgr.F01780 5.0kb upstream 5.0kb upstream 25151 true Chr06: 24035477-24060627 Eucalyptus grandis
Eucgr.F01780 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24055628-24060627 Eucalyptus grandis
Eucgr.F01780 5.0kb downstream 5.0kb downstream 25151 true Chr06: 24030477-24055627 Eucalyptus grandis
Eucgr.F01780 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24030477-24035476 Eucalyptus grandis
Eucgr.F01780 10.0kb upstream 10.0kb upstream 30151 true Chr06: 24035477-24065627 Eucalyptus grandis
Eucgr.F01780 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24055628-24065627 Eucalyptus grandis
Eucgr.F01780 10.0kb downstream 10.0kb downstream 30151 true Chr06: 24025477-24055627 Eucalyptus grandis
Eucgr.F01780 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24025477-24035476 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.446 0.0 88.9124 High Low
cufflinks 65.3754 0.0 179.385 High High
cufflinks 70.7761 0.0 260.722 High High
cufflinks 35.5918 0.0 89.1187    
cufflinks 44.683 0.0 118.247 High  
cufflinks 46.6429 0.0 123.952 High  

0 Strain