Gene : Eucgr.F01776 E. grandis v2.0
Defline:  (1 of 5) PTHR11465//PTHR11465:SF19 - CATALASE Genomic Order:  1526
Name:  ? Eucgr.F01776 Secondary Identifier:  ? PAC:32056131
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis DETOX1-PWY Eucalyptus grandis pathologic  
Egrandis DETOX1-PWY-1 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01776 0.5kb upstream 0.5kb upstream 5541 true Chr06: 23993541-23999081 Eucalyptus grandis
Eucgr.F01776 0.5kb upstream 0.5kb upstream 500 false Chr06: 23993541-23994040 Eucalyptus grandis
Eucgr.F01776 0.5kb downstream 0.5kb downstream 5541 true Chr06: 23994041-23999581 Eucalyptus grandis
Eucgr.F01776 0.5kb downstream 0.5kb downstream 500 false Chr06: 23999082-23999581 Eucalyptus grandis
Eucgr.F01776 1.0kb upstream 1.0kb upstream 6041 true Chr06: 23993041-23999081 Eucalyptus grandis
Eucgr.F01776 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23993041-23994040 Eucalyptus grandis
Eucgr.F01776 1.0kb downstream 1.0kb downstream 6041 true Chr06: 23994041-24000081 Eucalyptus grandis
Eucgr.F01776 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23999082-24000081 Eucalyptus grandis
Eucgr.F01776 2.0kb upstream 2.0kb upstream 7041 true Chr06: 23992041-23999081 Eucalyptus grandis
Eucgr.F01776 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23992041-23994040 Eucalyptus grandis
Eucgr.F01776 2.0kb downstream 2.0kb downstream 7041 true Chr06: 23994041-24001081 Eucalyptus grandis
Eucgr.F01776 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23999082-24001081 Eucalyptus grandis
Eucgr.F01776 5.0kb upstream 5.0kb upstream 10041 true Chr06: 23989041-23999081 Eucalyptus grandis
Eucgr.F01776 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23989041-23994040 Eucalyptus grandis
Eucgr.F01776 5.0kb downstream 5.0kb downstream 10041 true Chr06: 23994041-24004081 Eucalyptus grandis
Eucgr.F01776 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23999082-24004081 Eucalyptus grandis
Eucgr.F01776 10.0kb upstream 10.0kb upstream 15041 true Chr06: 23984041-23999081 Eucalyptus grandis
Eucgr.F01776 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23984041-23994040 Eucalyptus grandis
Eucgr.F01776 10.0kb downstream 10.0kb downstream 15041 true Chr06: 23994041-24009081 Eucalyptus grandis
Eucgr.F01776 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23999082-24009081 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074417 5270 Rosid View MSA
123647431 5271 Pentapetalae View MSA
122681407 5272 Eudicot View MSA
122050317 5273 Angiosperm View MSA
121311851 5274 Embryophyte View MSA
123349091 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.8536 0.0 92.9249 High Low
cufflinks 228.743 0.0 574.127 High  
cufflinks 99.2306 0.0 229.206 High  
cufflinks 150.957 0.0 361.033 High  
cufflinks 180.348 0.0 440.325 High  
cufflinks 167.462 0.0 407.939 High  

0 Strain