Gene : Eucgr.F01777 E. grandis v2.0
Defline:  (1 of 5) PTHR11465//PTHR11465:SF19 - CATALASE Genomic Order:  1527
Name:  ? Eucgr.F01777 Secondary Identifier:  ? PAC:32054526
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis DETOX1-PWY Eucalyptus grandis pathologic  
Egrandis DETOX1-PWY-1 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01777 0.5kb upstream 0.5kb upstream 4764 true Chr06: 23998983-24003746 Eucalyptus grandis
Eucgr.F01777 0.5kb upstream 0.5kb upstream 500 false Chr06: 23998983-23999482 Eucalyptus grandis
Eucgr.F01777 0.5kb downstream 0.5kb downstream 4764 true Chr06: 23999483-24004246 Eucalyptus grandis
Eucgr.F01777 0.5kb downstream 0.5kb downstream 500 false Chr06: 24003747-24004246 Eucalyptus grandis
Eucgr.F01777 1.0kb upstream 1.0kb upstream 5264 true Chr06: 23998483-24003746 Eucalyptus grandis
Eucgr.F01777 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23998483-23999482 Eucalyptus grandis
Eucgr.F01777 1.0kb downstream 1.0kb downstream 5264 true Chr06: 23999483-24004746 Eucalyptus grandis
Eucgr.F01777 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24003747-24004746 Eucalyptus grandis
Eucgr.F01777 2.0kb upstream 2.0kb upstream 6264 true Chr06: 23997483-24003746 Eucalyptus grandis
Eucgr.F01777 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23997483-23999482 Eucalyptus grandis
Eucgr.F01777 2.0kb downstream 2.0kb downstream 6264 true Chr06: 23999483-24005746 Eucalyptus grandis
Eucgr.F01777 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24003747-24005746 Eucalyptus grandis
Eucgr.F01777 5.0kb upstream 5.0kb upstream 9264 true Chr06: 23994483-24003746 Eucalyptus grandis
Eucgr.F01777 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23994483-23999482 Eucalyptus grandis
Eucgr.F01777 5.0kb downstream 5.0kb downstream 9264 true Chr06: 23999483-24008746 Eucalyptus grandis
Eucgr.F01777 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24003747-24008746 Eucalyptus grandis
Eucgr.F01777 10.0kb upstream 10.0kb upstream 14264 true Chr06: 23989483-24003746 Eucalyptus grandis
Eucgr.F01777 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23989483-23999482 Eucalyptus grandis
Eucgr.F01777 10.0kb downstream 10.0kb downstream 14264 true Chr06: 23999483-24013746 Eucalyptus grandis
Eucgr.F01777 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24003747-24013746 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.5883 0.0 101.353 High  
cufflinks 53.3528 0.0 119.443 High  
cufflinks 50.5072 0.0 112.616 High  
cufflinks 36.6889 0.0 81.2589    
cufflinks 30.1867 0.0 66.7567   Low
cufflinks 65.1532 0.0 146.567 High High

0 Strain