Gene : Eucgr.F01770 E. grandis v2.0
Defline:  (1 of 1) PTHR10357:SF110 - PROTEIN T04A8.7, ISOFORM A Genomic Order:  1520
Name:  ? Eucgr.F01770 Secondary Identifier:  ? PAC:32057101
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYCOGENSYNTH-PWY Eucalyptus grandis pathologic  
Egrandis PWY-622 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01770 0.5kb upstream 0.5kb upstream 9952 true Chr06: 23897692-23907643 Eucalyptus grandis
Eucgr.F01770 0.5kb upstream 0.5kb upstream 500 false Chr06: 23907144-23907643 Eucalyptus grandis
Eucgr.F01770 0.5kb downstream 0.5kb downstream 9952 true Chr06: 23897192-23907143 Eucalyptus grandis
Eucgr.F01770 0.5kb downstream 0.5kb downstream 500 false Chr06: 23897192-23897691 Eucalyptus grandis
Eucgr.F01770 1.0kb upstream 1.0kb upstream 10452 true Chr06: 23897692-23908143 Eucalyptus grandis
Eucgr.F01770 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23907144-23908143 Eucalyptus grandis
Eucgr.F01770 1.0kb downstream 1.0kb downstream 10452 true Chr06: 23896692-23907143 Eucalyptus grandis
Eucgr.F01770 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23896692-23897691 Eucalyptus grandis
Eucgr.F01770 2.0kb upstream 2.0kb upstream 11452 true Chr06: 23897692-23909143 Eucalyptus grandis
Eucgr.F01770 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23907144-23909143 Eucalyptus grandis
Eucgr.F01770 2.0kb downstream 2.0kb downstream 11452 true Chr06: 23895692-23907143 Eucalyptus grandis
Eucgr.F01770 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23895692-23897691 Eucalyptus grandis
Eucgr.F01770 5.0kb upstream 5.0kb upstream 14452 true Chr06: 23897692-23912143 Eucalyptus grandis
Eucgr.F01770 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23907144-23912143 Eucalyptus grandis
Eucgr.F01770 5.0kb downstream 5.0kb downstream 14452 true Chr06: 23892692-23907143 Eucalyptus grandis
Eucgr.F01770 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23892692-23897691 Eucalyptus grandis
Eucgr.F01770 10.0kb upstream 10.0kb upstream 19452 true Chr06: 23897692-23917143 Eucalyptus grandis
Eucgr.F01770 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23907144-23917143 Eucalyptus grandis
Eucgr.F01770 10.0kb downstream 10.0kb downstream 19452 true Chr06: 23887692-23907143 Eucalyptus grandis
Eucgr.F01770 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23887692-23897691 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069837 5270 Rosid View MSA
123742609 5271 Pentapetalae View MSA
122794740 5272 Eudicot View MSA
122048123 5273 Angiosperm View MSA
121348370 5274 Embryophyte View MSA
123425739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.77753 0.0 11.1316    
cufflinks 6.04211 0.0 13.7547    
cufflinks 4.69587 0.0 10.9127    
cufflinks 1.03041 0.0 2.75855   Low
cufflinks 3.8777 0.0 9.16778    
cufflinks 16.2124 0.0 35.8618   High

0 Strain