Gene : Eucgr.F01659 E. grandis v2.0
Defline:  (1 of 2) PTHR19878:SF4 - TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN Genomic Order:  1428
Name:  ? Eucgr.F01659 Secondary Identifier:  ? PAC:32052717
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01659 0.5kb upstream 0.5kb upstream 21017 true Chr06: 21940592-21961608 Eucalyptus grandis
Eucgr.F01659 0.5kb upstream 0.5kb upstream 500 false Chr06: 21961109-21961608 Eucalyptus grandis
Eucgr.F01659 0.5kb downstream 0.5kb downstream 21017 true Chr06: 21940092-21961108 Eucalyptus grandis
Eucgr.F01659 0.5kb downstream 0.5kb downstream 500 false Chr06: 21940092-21940591 Eucalyptus grandis
Eucgr.F01659 1.0kb upstream 1.0kb upstream 21517 true Chr06: 21940592-21962108 Eucalyptus grandis
Eucgr.F01659 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21961109-21962108 Eucalyptus grandis
Eucgr.F01659 1.0kb downstream 1.0kb downstream 21517 true Chr06: 21939592-21961108 Eucalyptus grandis
Eucgr.F01659 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21939592-21940591 Eucalyptus grandis
Eucgr.F01659 2.0kb upstream 2.0kb upstream 22517 true Chr06: 21940592-21963108 Eucalyptus grandis
Eucgr.F01659 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21961109-21963108 Eucalyptus grandis
Eucgr.F01659 2.0kb downstream 2.0kb downstream 22517 true Chr06: 21938592-21961108 Eucalyptus grandis
Eucgr.F01659 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21938592-21940591 Eucalyptus grandis
Eucgr.F01659 5.0kb upstream 5.0kb upstream 25517 true Chr06: 21940592-21966108 Eucalyptus grandis
Eucgr.F01659 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21961109-21966108 Eucalyptus grandis
Eucgr.F01659 5.0kb downstream 5.0kb downstream 25517 true Chr06: 21935592-21961108 Eucalyptus grandis
Eucgr.F01659 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21935592-21940591 Eucalyptus grandis
Eucgr.F01659 10.0kb upstream 10.0kb upstream 30517 true Chr06: 21940592-21971108 Eucalyptus grandis
Eucgr.F01659 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21961109-21971108 Eucalyptus grandis
Eucgr.F01659 10.0kb downstream 10.0kb downstream 30517 true Chr06: 21930592-21961108 Eucalyptus grandis
Eucgr.F01659 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21930592-21940591 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050225 5270 Rosid View MSA
123737752 5271 Pentapetalae View MSA
122788494 5272 Eudicot View MSA
122042112 5273 Angiosperm View MSA
121345827 5274 Embryophyte View MSA
123428290 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2291 0.0 29.3322    
cufflinks 33.218 0.0 77.4738   High
cufflinks 14.876 0.0 33.1062    
cufflinks 35.5326 0.0 83.3918   High
cufflinks 14.9011 0.0 33.1659    
cufflinks 16.9935 0.0 37.8513    

0 Strain