Gene : Eucgr.F01624 E. grandis v2.0
Defline:  (1 of 2) PTHR10263:SF13 - V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C4 Genomic Order:  1396
Name:  ? Eucgr.F01624 Secondary Identifier:  ? PAC:32052650
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01624 0.5kb upstream 0.5kb upstream 2994 true Chr06: 21525440-21528433 Eucalyptus grandis
Eucgr.F01624 0.5kb upstream 0.5kb upstream 500 false Chr06: 21527934-21528433 Eucalyptus grandis
Eucgr.F01624 0.5kb downstream 0.5kb downstream 2994 true Chr06: 21524940-21527933 Eucalyptus grandis
Eucgr.F01624 0.5kb downstream 0.5kb downstream 500 false Chr06: 21524940-21525439 Eucalyptus grandis
Eucgr.F01624 1.0kb upstream 1.0kb upstream 3494 true Chr06: 21525440-21528933 Eucalyptus grandis
Eucgr.F01624 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21527934-21528933 Eucalyptus grandis
Eucgr.F01624 1.0kb downstream 1.0kb downstream 3494 true Chr06: 21524440-21527933 Eucalyptus grandis
Eucgr.F01624 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21524440-21525439 Eucalyptus grandis
Eucgr.F01624 2.0kb upstream 2.0kb upstream 4494 true Chr06: 21525440-21529933 Eucalyptus grandis
Eucgr.F01624 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21527934-21529933 Eucalyptus grandis
Eucgr.F01624 2.0kb downstream 2.0kb downstream 4494 true Chr06: 21523440-21527933 Eucalyptus grandis
Eucgr.F01624 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21523440-21525439 Eucalyptus grandis
Eucgr.F01624 5.0kb upstream 5.0kb upstream 7494 true Chr06: 21525440-21532933 Eucalyptus grandis
Eucgr.F01624 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21527934-21532933 Eucalyptus grandis
Eucgr.F01624 5.0kb downstream 5.0kb downstream 7494 true Chr06: 21520440-21527933 Eucalyptus grandis
Eucgr.F01624 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21520440-21525439 Eucalyptus grandis
Eucgr.F01624 10.0kb upstream 10.0kb upstream 12494 true Chr06: 21525440-21537933 Eucalyptus grandis
Eucgr.F01624 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21527934-21537933 Eucalyptus grandis
Eucgr.F01624 10.0kb downstream 10.0kb downstream 12494 true Chr06: 21515440-21527933 Eucalyptus grandis
Eucgr.F01624 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21515440-21525439 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071141 5270 Rosid View MSA
123751721 5271 Pentapetalae View MSA
122796043 5272 Eudicot View MSA
122048360 5273 Angiosperm View MSA
121348011 5274 Embryophyte View MSA
123424193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 115.122 0.0 255.641 High  
cufflinks 489.768 0.0 1190.73 High High
cufflinks 116.14 0.0 257.459 High  
cufflinks 575.154 0.0 1415.6 High High
cufflinks 246.519 0.0 566.038 High  
cufflinks 159.131 0.0 356.859 High  

0 Strain