Gene : Eucgr.F01540 E. grandis v2.0
Defline:  (1 of 2) PTHR12829 - N6-ADENOSINE-METHYLTRANSFERASE Genomic Order:  1315
Name:  ? Eucgr.F01540 Secondary Identifier:  ? PAC:32054439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01540 0.5kb upstream 0.5kb upstream 3383 true Chr06: 20748769-20752151 Eucalyptus grandis
Eucgr.F01540 0.5kb upstream 0.5kb upstream 500 false Chr06: 20748769-20749268 Eucalyptus grandis
Eucgr.F01540 0.5kb downstream 0.5kb downstream 3383 true Chr06: 20749269-20752651 Eucalyptus grandis
Eucgr.F01540 0.5kb downstream 0.5kb downstream 500 false Chr06: 20752152-20752651 Eucalyptus grandis
Eucgr.F01540 1.0kb upstream 1.0kb upstream 3883 true Chr06: 20748269-20752151 Eucalyptus grandis
Eucgr.F01540 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20748269-20749268 Eucalyptus grandis
Eucgr.F01540 1.0kb downstream 1.0kb downstream 3883 true Chr06: 20749269-20753151 Eucalyptus grandis
Eucgr.F01540 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20752152-20753151 Eucalyptus grandis
Eucgr.F01540 2.0kb upstream 2.0kb upstream 4883 true Chr06: 20747269-20752151 Eucalyptus grandis
Eucgr.F01540 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20747269-20749268 Eucalyptus grandis
Eucgr.F01540 2.0kb downstream 2.0kb downstream 4883 true Chr06: 20749269-20754151 Eucalyptus grandis
Eucgr.F01540 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20752152-20754151 Eucalyptus grandis
Eucgr.F01540 5.0kb upstream 5.0kb upstream 7883 true Chr06: 20744269-20752151 Eucalyptus grandis
Eucgr.F01540 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20744269-20749268 Eucalyptus grandis
Eucgr.F01540 5.0kb downstream 5.0kb downstream 7883 true Chr06: 20749269-20757151 Eucalyptus grandis
Eucgr.F01540 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20752152-20757151 Eucalyptus grandis
Eucgr.F01540 10.0kb upstream 10.0kb upstream 12883 true Chr06: 20739269-20752151 Eucalyptus grandis
Eucgr.F01540 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20739269-20749268 Eucalyptus grandis
Eucgr.F01540 10.0kb downstream 10.0kb downstream 12883 true Chr06: 20749269-20762151 Eucalyptus grandis
Eucgr.F01540 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20752152-20762151 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041346 5273 Angiosperm View MSA
124068537 5270 Rosid View MSA
123738217 5271 Pentapetalae View MSA
122788496 5272 Eudicot View MSA
121344904 5274 Embryophyte View MSA
123380126 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.38429 0.0 11.2867    
cufflinks 0.539587 0.0 1.73718 Low Low
cufflinks 4.79742 0.0 12.2511    
cufflinks 3.5605 0.0 9.33877    
cufflinks 2.34152 0.0 6.42103    
cufflinks 0.570578 0.0 1.83502 Low Low

0 Strain