Gene : Eucgr.F02036 E. grandis v2.0
Defline:  (1 of 3) PTHR22807:SF30 - RIBOSOMAL RNA METHYLTRANSFERASE NOP2-RELATED Genomic Order:  1678
Name:  ? Eucgr.F02036 Secondary Identifier:  ? PAC:32056021
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02036 0.5kb upstream 0.5kb upstream 7764 true Chr06: 26863253-26871016 Eucalyptus grandis
Eucgr.F02036 0.5kb upstream 0.5kb upstream 500 false Chr06: 26863253-26863752 Eucalyptus grandis
Eucgr.F02036 0.5kb downstream 0.5kb downstream 7764 true Chr06: 26863753-26871516 Eucalyptus grandis
Eucgr.F02036 0.5kb downstream 0.5kb downstream 500 false Chr06: 26871017-26871516 Eucalyptus grandis
Eucgr.F02036 1.0kb upstream 1.0kb upstream 8264 true Chr06: 26862753-26871016 Eucalyptus grandis
Eucgr.F02036 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26862753-26863752 Eucalyptus grandis
Eucgr.F02036 1.0kb downstream 1.0kb downstream 8264 true Chr06: 26863753-26872016 Eucalyptus grandis
Eucgr.F02036 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26871017-26872016 Eucalyptus grandis
Eucgr.F02036 2.0kb upstream 2.0kb upstream 9264 true Chr06: 26861753-26871016 Eucalyptus grandis
Eucgr.F02036 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26861753-26863752 Eucalyptus grandis
Eucgr.F02036 2.0kb downstream 2.0kb downstream 9264 true Chr06: 26863753-26873016 Eucalyptus grandis
Eucgr.F02036 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26871017-26873016 Eucalyptus grandis
Eucgr.F02036 5.0kb upstream 5.0kb upstream 12264 true Chr06: 26858753-26871016 Eucalyptus grandis
Eucgr.F02036 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26858753-26863752 Eucalyptus grandis
Eucgr.F02036 5.0kb downstream 5.0kb downstream 12264 true Chr06: 26863753-26876016 Eucalyptus grandis
Eucgr.F02036 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26871017-26876016 Eucalyptus grandis
Eucgr.F02036 10.0kb upstream 10.0kb upstream 17264 true Chr06: 26853753-26871016 Eucalyptus grandis
Eucgr.F02036 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26853753-26863752 Eucalyptus grandis
Eucgr.F02036 10.0kb downstream 10.0kb downstream 17264 true Chr06: 26863753-26881016 Eucalyptus grandis
Eucgr.F02036 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26871017-26881016 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073549 5270 Rosid View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.29568 0.0 19.0897    
cufflinks 8.50671 0.0 19.4447    
cufflinks 8.10196 0.0 20.8918    
cufflinks 6.93886 0.0 16.1891   Low
cufflinks 6.97339 0.0 16.2744    
cufflinks 9.0747 0.0 21.0126   High

0 Strain