Gene : Eucgr.F02039 E. grandis v2.0
Defline:  (1 of 11) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  1681
Name:  ? Eucgr.F02039 Secondary Identifier:  ? PAC:32054080
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02039 0.5kb upstream 0.5kb upstream 6217 true Chr06: 26893527-26899743 Eucalyptus grandis
Eucgr.F02039 0.5kb upstream 0.5kb upstream 500 false Chr06: 26899244-26899743 Eucalyptus grandis
Eucgr.F02039 0.5kb downstream 0.5kb downstream 6217 true Chr06: 26893027-26899243 Eucalyptus grandis
Eucgr.F02039 0.5kb downstream 0.5kb downstream 500 false Chr06: 26893027-26893526 Eucalyptus grandis
Eucgr.F02039 1.0kb upstream 1.0kb upstream 6717 true Chr06: 26893527-26900243 Eucalyptus grandis
Eucgr.F02039 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26899244-26900243 Eucalyptus grandis
Eucgr.F02039 1.0kb downstream 1.0kb downstream 6717 true Chr06: 26892527-26899243 Eucalyptus grandis
Eucgr.F02039 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26892527-26893526 Eucalyptus grandis
Eucgr.F02039 2.0kb upstream 2.0kb upstream 7717 true Chr06: 26893527-26901243 Eucalyptus grandis
Eucgr.F02039 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26899244-26901243 Eucalyptus grandis
Eucgr.F02039 2.0kb downstream 2.0kb downstream 7717 true Chr06: 26891527-26899243 Eucalyptus grandis
Eucgr.F02039 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26891527-26893526 Eucalyptus grandis
Eucgr.F02039 5.0kb upstream 5.0kb upstream 10717 true Chr06: 26893527-26904243 Eucalyptus grandis
Eucgr.F02039 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26899244-26904243 Eucalyptus grandis
Eucgr.F02039 5.0kb downstream 5.0kb downstream 10717 true Chr06: 26888527-26899243 Eucalyptus grandis
Eucgr.F02039 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26888527-26893526 Eucalyptus grandis
Eucgr.F02039 10.0kb upstream 10.0kb upstream 15717 true Chr06: 26893527-26909243 Eucalyptus grandis
Eucgr.F02039 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26899244-26909243 Eucalyptus grandis
Eucgr.F02039 10.0kb downstream 10.0kb downstream 15717 true Chr06: 26883527-26899243 Eucalyptus grandis
Eucgr.F02039 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26883527-26893526 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065828 5270 Rosid View MSA
123740930 5271 Pentapetalae View MSA
122786226 5272 Eudicot View MSA
122043167 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6295 0.0 27.9343    
cufflinks 5.17638 0.0 11.7839    
cufflinks 11.5299 0.0 25.5111    
cufflinks 3.64329 0.0 8.48885   Low
cufflinks 8.26013 0.0 18.4036    
cufflinks 17.9634 0.0 39.7924   High

0 Strain