Gene : Eucgr.F02001 E. grandis v2.0
Defline:  (1 of 1) PTHR32170:SF0 - PROTEIN T28B8.3, ISOFORM A-RELATED Genomic Order:  1646
Name:  ? Eucgr.F02001 Secondary Identifier:  ? PAC:32057654
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02001 0.5kb upstream 0.5kb upstream 17392 true Chr06: 26461688-26479079 Eucalyptus grandis
Eucgr.F02001 0.5kb upstream 0.5kb upstream 500 false Chr06: 26461688-26462187 Eucalyptus grandis
Eucgr.F02001 0.5kb downstream 0.5kb downstream 17392 true Chr06: 26462188-26479579 Eucalyptus grandis
Eucgr.F02001 0.5kb downstream 0.5kb downstream 500 false Chr06: 26479080-26479579 Eucalyptus grandis
Eucgr.F02001 1.0kb upstream 1.0kb upstream 17892 true Chr06: 26461188-26479079 Eucalyptus grandis
Eucgr.F02001 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26461188-26462187 Eucalyptus grandis
Eucgr.F02001 1.0kb downstream 1.0kb downstream 17892 true Chr06: 26462188-26480079 Eucalyptus grandis
Eucgr.F02001 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26479080-26480079 Eucalyptus grandis
Eucgr.F02001 2.0kb upstream 2.0kb upstream 18892 true Chr06: 26460188-26479079 Eucalyptus grandis
Eucgr.F02001 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26460188-26462187 Eucalyptus grandis
Eucgr.F02001 2.0kb downstream 2.0kb downstream 18892 true Chr06: 26462188-26481079 Eucalyptus grandis
Eucgr.F02001 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26479080-26481079 Eucalyptus grandis
Eucgr.F02001 5.0kb upstream 5.0kb upstream 21892 true Chr06: 26457188-26479079 Eucalyptus grandis
Eucgr.F02001 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26457188-26462187 Eucalyptus grandis
Eucgr.F02001 5.0kb downstream 5.0kb downstream 21892 true Chr06: 26462188-26484079 Eucalyptus grandis
Eucgr.F02001 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26479080-26484079 Eucalyptus grandis
Eucgr.F02001 10.0kb upstream 10.0kb upstream 26892 true Chr06: 26452188-26479079 Eucalyptus grandis
Eucgr.F02001 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26452188-26462187 Eucalyptus grandis
Eucgr.F02001 10.0kb downstream 10.0kb downstream 26892 true Chr06: 26462188-26489079 Eucalyptus grandis
Eucgr.F02001 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26479080-26489079 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067212 5270 Rosid View MSA
123738466 5271 Pentapetalae View MSA
122787413 5272 Eudicot View MSA
122041914 5273 Angiosperm View MSA
121345239 5274 Embryophyte View MSA
123424572 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2103 0.0 38.5497    
cufflinks 13.2531 0.0 30.6212    
cufflinks 14.9997 0.0 34.8569    
cufflinks 14.1136 0.0 38.3762    
cufflinks 8.42474 0.0 18.9015   Low
cufflinks 18.405 0.0 43.3506   High

0 Strain