Gene : Eucgr.F02560 E. grandis v2.0
Defline:  (1 of 1) PTHR32370:SF16 - NON-PHOTOTROPIC HYPOCOTYL-LIKE PROTEIN Genomic Order:  2241
Name:  ? Eucgr.F02560 Secondary Identifier:  ? PAC:32056683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02560 0.5kb upstream 0.5kb upstream 3953 true Chr06: 37634386-37638338 Eucalyptus grandis
Eucgr.F02560 0.5kb upstream 0.5kb upstream 500 false Chr06: 37634386-37634885 Eucalyptus grandis
Eucgr.F02560 0.5kb downstream 0.5kb downstream 3953 true Chr06: 37634886-37638838 Eucalyptus grandis
Eucgr.F02560 0.5kb downstream 0.5kb downstream 500 false Chr06: 37638339-37638838 Eucalyptus grandis
Eucgr.F02560 1.0kb upstream 1.0kb upstream 4453 true Chr06: 37633886-37638338 Eucalyptus grandis
Eucgr.F02560 1.0kb upstream 1.0kb upstream 1000 false Chr06: 37633886-37634885 Eucalyptus grandis
Eucgr.F02560 1.0kb downstream 1.0kb downstream 4453 true Chr06: 37634886-37639338 Eucalyptus grandis
Eucgr.F02560 1.0kb downstream 1.0kb downstream 1000 false Chr06: 37638339-37639338 Eucalyptus grandis
Eucgr.F02560 2.0kb upstream 2.0kb upstream 5453 true Chr06: 37632886-37638338 Eucalyptus grandis
Eucgr.F02560 2.0kb upstream 2.0kb upstream 2000 false Chr06: 37632886-37634885 Eucalyptus grandis
Eucgr.F02560 2.0kb downstream 2.0kb downstream 5453 true Chr06: 37634886-37640338 Eucalyptus grandis
Eucgr.F02560 2.0kb downstream 2.0kb downstream 2000 false Chr06: 37638339-37640338 Eucalyptus grandis
Eucgr.F02560 5.0kb upstream 5.0kb upstream 8453 true Chr06: 37629886-37638338 Eucalyptus grandis
Eucgr.F02560 5.0kb upstream 5.0kb upstream 5000 false Chr06: 37629886-37634885 Eucalyptus grandis
Eucgr.F02560 5.0kb downstream 5.0kb downstream 8453 true Chr06: 37634886-37643338 Eucalyptus grandis
Eucgr.F02560 5.0kb downstream 5.0kb downstream 5000 false Chr06: 37638339-37643338 Eucalyptus grandis
Eucgr.F02560 10.0kb upstream 10.0kb upstream 13453 true Chr06: 37624886-37638338 Eucalyptus grandis
Eucgr.F02560 10.0kb upstream 10.0kb upstream 10000 false Chr06: 37624886-37634885 Eucalyptus grandis
Eucgr.F02560 10.0kb downstream 10.0kb downstream 13453 true Chr06: 37634886-37648338 Eucalyptus grandis
Eucgr.F02560 10.0kb downstream 10.0kb downstream 10000 false Chr06: 37638339-37648338 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065820 5270 Rosid View MSA
123742198 5271 Pentapetalae View MSA
122787661 5272 Eudicot View MSA
122051145 5273 Angiosperm View MSA
121347829 5274 Embryophyte View MSA
123380647 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9988 0.0 25.424    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.66394 0.0 4.65624   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 24.9008 0.0 55.1836    

0 Strain