Gene : Eucgr.F02531 E. grandis v2.0
Defline:  (1 of 64) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  2215
Name:  ? Eucgr.F02531 Secondary Identifier:  ? PAC:32054475
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02531 0.5kb upstream 0.5kb upstream 3019 true Chr06: 37446692-37449710 Eucalyptus grandis
Eucgr.F02531 0.5kb upstream 0.5kb upstream 500 false Chr06: 37446692-37447191 Eucalyptus grandis
Eucgr.F02531 0.5kb downstream 0.5kb downstream 3019 true Chr06: 37447192-37450210 Eucalyptus grandis
Eucgr.F02531 0.5kb downstream 0.5kb downstream 500 false Chr06: 37449711-37450210 Eucalyptus grandis
Eucgr.F02531 1.0kb upstream 1.0kb upstream 3519 true Chr06: 37446192-37449710 Eucalyptus grandis
Eucgr.F02531 1.0kb upstream 1.0kb upstream 1000 false Chr06: 37446192-37447191 Eucalyptus grandis
Eucgr.F02531 1.0kb downstream 1.0kb downstream 3519 true Chr06: 37447192-37450710 Eucalyptus grandis
Eucgr.F02531 1.0kb downstream 1.0kb downstream 1000 false Chr06: 37449711-37450710 Eucalyptus grandis
Eucgr.F02531 2.0kb upstream 2.0kb upstream 4519 true Chr06: 37445192-37449710 Eucalyptus grandis
Eucgr.F02531 2.0kb upstream 2.0kb upstream 2000 false Chr06: 37445192-37447191 Eucalyptus grandis
Eucgr.F02531 2.0kb downstream 2.0kb downstream 4519 true Chr06: 37447192-37451710 Eucalyptus grandis
Eucgr.F02531 2.0kb downstream 2.0kb downstream 2000 false Chr06: 37449711-37451710 Eucalyptus grandis
Eucgr.F02531 5.0kb upstream 5.0kb upstream 7519 true Chr06: 37442192-37449710 Eucalyptus grandis
Eucgr.F02531 5.0kb upstream 5.0kb upstream 5000 false Chr06: 37442192-37447191 Eucalyptus grandis
Eucgr.F02531 5.0kb downstream 5.0kb downstream 7519 true Chr06: 37447192-37454710 Eucalyptus grandis
Eucgr.F02531 5.0kb downstream 5.0kb downstream 5000 false Chr06: 37449711-37454710 Eucalyptus grandis
Eucgr.F02531 10.0kb upstream 10.0kb upstream 12519 true Chr06: 37437192-37449710 Eucalyptus grandis
Eucgr.F02531 10.0kb upstream 10.0kb upstream 10000 false Chr06: 37437192-37447191 Eucalyptus grandis
Eucgr.F02531 10.0kb downstream 10.0kb downstream 12519 true Chr06: 37447192-37459710 Eucalyptus grandis
Eucgr.F02531 10.0kb downstream 10.0kb downstream 10000 false Chr06: 37449711-37459710 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain