Gene : Eucgr.F02349 E. grandis v2.0
Defline:  (1 of 3) 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Genomic Order:  1857
Name:  ? Eucgr.F02349 Secondary Identifier:  ? PAC:32056151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02349 0.5kb upstream 0.5kb upstream 2955 true Chr06: 31278423-31281377 Eucalyptus grandis
Eucgr.F02349 0.5kb upstream 0.5kb upstream 500 false Chr06: 31280878-31281377 Eucalyptus grandis
Eucgr.F02349 0.5kb downstream 0.5kb downstream 2955 true Chr06: 31277923-31280877 Eucalyptus grandis
Eucgr.F02349 0.5kb downstream 0.5kb downstream 500 false Chr06: 31277923-31278422 Eucalyptus grandis
Eucgr.F02349 1.0kb upstream 1.0kb upstream 3455 true Chr06: 31278423-31281877 Eucalyptus grandis
Eucgr.F02349 1.0kb upstream 1.0kb upstream 1000 false Chr06: 31280878-31281877 Eucalyptus grandis
Eucgr.F02349 1.0kb downstream 1.0kb downstream 3455 true Chr06: 31277423-31280877 Eucalyptus grandis
Eucgr.F02349 1.0kb downstream 1.0kb downstream 1000 false Chr06: 31277423-31278422 Eucalyptus grandis
Eucgr.F02349 2.0kb upstream 2.0kb upstream 4455 true Chr06: 31278423-31282877 Eucalyptus grandis
Eucgr.F02349 2.0kb upstream 2.0kb upstream 2000 false Chr06: 31280878-31282877 Eucalyptus grandis
Eucgr.F02349 2.0kb downstream 2.0kb downstream 4455 true Chr06: 31276423-31280877 Eucalyptus grandis
Eucgr.F02349 2.0kb downstream 2.0kb downstream 2000 false Chr06: 31276423-31278422 Eucalyptus grandis
Eucgr.F02349 5.0kb upstream 5.0kb upstream 7455 true Chr06: 31278423-31285877 Eucalyptus grandis
Eucgr.F02349 5.0kb upstream 5.0kb upstream 5000 false Chr06: 31280878-31285877 Eucalyptus grandis
Eucgr.F02349 5.0kb downstream 5.0kb downstream 7455 true Chr06: 31273423-31280877 Eucalyptus grandis
Eucgr.F02349 5.0kb downstream 5.0kb downstream 5000 false Chr06: 31273423-31278422 Eucalyptus grandis
Eucgr.F02349 10.0kb upstream 10.0kb upstream 12455 true Chr06: 31278423-31290877 Eucalyptus grandis
Eucgr.F02349 10.0kb upstream 10.0kb upstream 10000 false Chr06: 31280878-31290877 Eucalyptus grandis
Eucgr.F02349 10.0kb downstream 10.0kb downstream 12455 true Chr06: 31268423-31280877 Eucalyptus grandis
Eucgr.F02349 10.0kb downstream 10.0kb downstream 10000 false Chr06: 31268423-31278422 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065639 5270 Rosid View MSA
123738946 5271 Pentapetalae View MSA
122797771 5272 Eudicot View MSA
122048230 5273 Angiosperm View MSA
121344557 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.09542 0.0 14.4743    
cufflinks 0.926484 0.0 2.64703    
cufflinks 7.39634 0.0 17.2562    
cufflinks 0.463386 0.0 1.43118   Low
cufflinks 0.459636 0.0 1.42168 Low Low
cufflinks 14.3273 0.0 32.0795   High

0 Strain