Gene : Eucgr.F02347 E. grandis v2.0
Defline:  (1 of 3) 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Genomic Order:  1858
Name:  ? Eucgr.F02347 Secondary Identifier:  ? PAC:32053156
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02347 0.5kb upstream 0.5kb upstream 8620 true Chr06: 31288299-31296918 Eucalyptus grandis
Eucgr.F02347 0.5kb upstream 0.5kb upstream 500 false Chr06: 31296419-31296918 Eucalyptus grandis
Eucgr.F02347 0.5kb downstream 0.5kb downstream 8620 true Chr06: 31287799-31296418 Eucalyptus grandis
Eucgr.F02347 0.5kb downstream 0.5kb downstream 500 false Chr06: 31287799-31288298 Eucalyptus grandis
Eucgr.F02347 1.0kb upstream 1.0kb upstream 9120 true Chr06: 31288299-31297418 Eucalyptus grandis
Eucgr.F02347 1.0kb upstream 1.0kb upstream 1000 false Chr06: 31296419-31297418 Eucalyptus grandis
Eucgr.F02347 1.0kb downstream 1.0kb downstream 9120 true Chr06: 31287299-31296418 Eucalyptus grandis
Eucgr.F02347 1.0kb downstream 1.0kb downstream 1000 false Chr06: 31287299-31288298 Eucalyptus grandis
Eucgr.F02347 2.0kb upstream 2.0kb upstream 10120 true Chr06: 31288299-31298418 Eucalyptus grandis
Eucgr.F02347 2.0kb upstream 2.0kb upstream 2000 false Chr06: 31296419-31298418 Eucalyptus grandis
Eucgr.F02347 2.0kb downstream 2.0kb downstream 10120 true Chr06: 31286299-31296418 Eucalyptus grandis
Eucgr.F02347 2.0kb downstream 2.0kb downstream 2000 false Chr06: 31286299-31288298 Eucalyptus grandis
Eucgr.F02347 5.0kb upstream 5.0kb upstream 13120 true Chr06: 31288299-31301418 Eucalyptus grandis
Eucgr.F02347 5.0kb upstream 5.0kb upstream 5000 false Chr06: 31296419-31301418 Eucalyptus grandis
Eucgr.F02347 5.0kb downstream 5.0kb downstream 13120 true Chr06: 31283299-31296418 Eucalyptus grandis
Eucgr.F02347 5.0kb downstream 5.0kb downstream 5000 false Chr06: 31283299-31288298 Eucalyptus grandis
Eucgr.F02347 10.0kb upstream 10.0kb upstream 18120 true Chr06: 31288299-31306418 Eucalyptus grandis
Eucgr.F02347 10.0kb upstream 10.0kb upstream 10000 false Chr06: 31296419-31306418 Eucalyptus grandis
Eucgr.F02347 10.0kb downstream 10.0kb downstream 18120 true Chr06: 31278299-31296418 Eucalyptus grandis
Eucgr.F02347 10.0kb downstream 10.0kb downstream 10000 false Chr06: 31278299-31288298 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065639 5270 Rosid View MSA
123738946 5271 Pentapetalae View MSA
122797771 5272 Eudicot View MSA
122048230 5273 Angiosperm View MSA
121344557 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.7522 0.0 185.265 High  
cufflinks 0.443139 0.0 1.60185 Low Low
cufflinks 60.0678 0.0 173.159 High  
cufflinks 1.53539 0.0 5.13994    
cufflinks 3.52265 0.0 10.7687    
cufflinks 67.8398 0.0 201.863 High  

0 Strain