Gene : Eucgr.F03008 E. grandis v2.0
Defline:  (1 of 1) PTHR16684 - CENTROMERE PROTEIN C Genomic Order:  2663
Name:  ? Eucgr.F03008 Secondary Identifier:  ? PAC:32056259
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03008 0.5kb upstream 0.5kb upstream 6986 true Chr06: 42199748-42206733 Eucalyptus grandis
Eucgr.F03008 0.5kb upstream 0.5kb upstream 500 false Chr06: 42199748-42200247 Eucalyptus grandis
Eucgr.F03008 0.5kb downstream 0.5kb downstream 6986 true Chr06: 42200248-42207233 Eucalyptus grandis
Eucgr.F03008 0.5kb downstream 0.5kb downstream 500 false Chr06: 42206734-42207233 Eucalyptus grandis
Eucgr.F03008 1.0kb upstream 1.0kb upstream 7486 true Chr06: 42199248-42206733 Eucalyptus grandis
Eucgr.F03008 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42199248-42200247 Eucalyptus grandis
Eucgr.F03008 1.0kb downstream 1.0kb downstream 7486 true Chr06: 42200248-42207733 Eucalyptus grandis
Eucgr.F03008 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42206734-42207733 Eucalyptus grandis
Eucgr.F03008 2.0kb upstream 2.0kb upstream 8486 true Chr06: 42198248-42206733 Eucalyptus grandis
Eucgr.F03008 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42198248-42200247 Eucalyptus grandis
Eucgr.F03008 2.0kb downstream 2.0kb downstream 8486 true Chr06: 42200248-42208733 Eucalyptus grandis
Eucgr.F03008 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42206734-42208733 Eucalyptus grandis
Eucgr.F03008 5.0kb upstream 5.0kb upstream 11486 true Chr06: 42195248-42206733 Eucalyptus grandis
Eucgr.F03008 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42195248-42200247 Eucalyptus grandis
Eucgr.F03008 5.0kb downstream 5.0kb downstream 11486 true Chr06: 42200248-42211733 Eucalyptus grandis
Eucgr.F03008 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42206734-42211733 Eucalyptus grandis
Eucgr.F03008 10.0kb upstream 10.0kb upstream 16486 true Chr06: 42190248-42206733 Eucalyptus grandis
Eucgr.F03008 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42190248-42200247 Eucalyptus grandis
Eucgr.F03008 10.0kb downstream 10.0kb downstream 16486 true Chr06: 42200248-42216733 Eucalyptus grandis
Eucgr.F03008 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42206734-42216733 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069711 5270 Rosid View MSA
123738687 5271 Pentapetalae View MSA
122788582 5272 Eudicot View MSA
122045185 5273 Angiosperm View MSA
121350045 5274 Embryophyte View MSA
123426660 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.49183 0.0 10.7223   High
cufflinks 2.5013 0.0 6.28281    
cufflinks 2.71433 0.0 6.7782    
cufflinks 0.381561 0.0 1.16353 Low Low
cufflinks 0.531507 0.0 1.56797 Low  
cufflinks 0.554313 0.0 1.63887 Low  

0 Strain