Gene : Eucgr.F02916 E. grandis v2.0
Defline:  (1 of 3) PTHR15184:SF43 - ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTIC Genomic Order:  2574
Name:  ? Eucgr.F02916 Secondary Identifier:  ? PAC:32053627
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6126 Eucalyptus grandis pathologic  
Egrandis PWY-7219 Eucalyptus grandis pathologic  
Egrandis PWY-7229 Eucalyptus grandis pathologic  
Egrandis PWY-841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02916 0.5kb upstream 0.5kb upstream 900 true Chr06: 41316882-41317781 Eucalyptus grandis
Eucgr.F02916 0.5kb upstream 0.5kb upstream 500 false Chr06: 41317282-41317781 Eucalyptus grandis
Eucgr.F02916 0.5kb downstream 0.5kb downstream 900 true Chr06: 41316382-41317281 Eucalyptus grandis
Eucgr.F02916 0.5kb downstream 0.5kb downstream 500 false Chr06: 41316382-41316881 Eucalyptus grandis
Eucgr.F02916 1.0kb upstream 1.0kb upstream 1400 true Chr06: 41316882-41318281 Eucalyptus grandis
Eucgr.F02916 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41317282-41318281 Eucalyptus grandis
Eucgr.F02916 1.0kb downstream 1.0kb downstream 1400 true Chr06: 41315882-41317281 Eucalyptus grandis
Eucgr.F02916 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41315882-41316881 Eucalyptus grandis
Eucgr.F02916 2.0kb upstream 2.0kb upstream 2400 true Chr06: 41316882-41319281 Eucalyptus grandis
Eucgr.F02916 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41317282-41319281 Eucalyptus grandis
Eucgr.F02916 2.0kb downstream 2.0kb downstream 2400 true Chr06: 41314882-41317281 Eucalyptus grandis
Eucgr.F02916 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41314882-41316881 Eucalyptus grandis
Eucgr.F02916 5.0kb upstream 5.0kb upstream 5400 true Chr06: 41316882-41322281 Eucalyptus grandis
Eucgr.F02916 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41317282-41322281 Eucalyptus grandis
Eucgr.F02916 5.0kb downstream 5.0kb downstream 5400 true Chr06: 41311882-41317281 Eucalyptus grandis
Eucgr.F02916 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41311882-41316881 Eucalyptus grandis
Eucgr.F02916 10.0kb upstream 10.0kb upstream 10400 true Chr06: 41316882-41327281 Eucalyptus grandis
Eucgr.F02916 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41317282-41327281 Eucalyptus grandis
Eucgr.F02916 10.0kb downstream 10.0kb downstream 10400 true Chr06: 41306882-41317281 Eucalyptus grandis
Eucgr.F02916 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41306882-41316881 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124046899 5270 Rosid Singleton cluster - no MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0127346 0.0 0.383378 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain