Gene : Eucgr.F02877 E. grandis v2.0
Defline:  (1 of 2) PTHR28620:SF1 - PROTEIN F25B4.8, ISOFORM A Genomic Order:  2536
Name:  ? Eucgr.F02877 Secondary Identifier:  ? PAC:32056501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02877 0.5kb upstream 0.5kb upstream 2874 true Chr06: 40958343-40961216 Eucalyptus grandis
Eucgr.F02877 0.5kb upstream 0.5kb upstream 500 false Chr06: 40960717-40961216 Eucalyptus grandis
Eucgr.F02877 0.5kb downstream 0.5kb downstream 2874 true Chr06: 40957843-40960716 Eucalyptus grandis
Eucgr.F02877 0.5kb downstream 0.5kb downstream 500 false Chr06: 40957843-40958342 Eucalyptus grandis
Eucgr.F02877 1.0kb upstream 1.0kb upstream 3374 true Chr06: 40958343-40961716 Eucalyptus grandis
Eucgr.F02877 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40960717-40961716 Eucalyptus grandis
Eucgr.F02877 1.0kb downstream 1.0kb downstream 3374 true Chr06: 40957343-40960716 Eucalyptus grandis
Eucgr.F02877 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40957343-40958342 Eucalyptus grandis
Eucgr.F02877 2.0kb upstream 2.0kb upstream 4374 true Chr06: 40958343-40962716 Eucalyptus grandis
Eucgr.F02877 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40960717-40962716 Eucalyptus grandis
Eucgr.F02877 2.0kb downstream 2.0kb downstream 4374 true Chr06: 40956343-40960716 Eucalyptus grandis
Eucgr.F02877 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40956343-40958342 Eucalyptus grandis
Eucgr.F02877 5.0kb upstream 5.0kb upstream 7374 true Chr06: 40958343-40965716 Eucalyptus grandis
Eucgr.F02877 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40960717-40965716 Eucalyptus grandis
Eucgr.F02877 5.0kb downstream 5.0kb downstream 7374 true Chr06: 40953343-40960716 Eucalyptus grandis
Eucgr.F02877 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40953343-40958342 Eucalyptus grandis
Eucgr.F02877 10.0kb upstream 10.0kb upstream 12374 true Chr06: 40958343-40970716 Eucalyptus grandis
Eucgr.F02877 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40960717-40970716 Eucalyptus grandis
Eucgr.F02877 10.0kb downstream 10.0kb downstream 12374 true Chr06: 40948343-40960716 Eucalyptus grandis
Eucgr.F02877 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40948343-40958342 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068266 5270 Rosid View MSA
123738048 5271 Pentapetalae View MSA
122791227 5272 Eudicot View MSA
122046805 5273 Angiosperm View MSA
121351715 5274 Embryophyte View MSA
123426563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.75097 0.0 5.10464    
cufflinks 17.3974 0.0 40.1426   High
cufflinks 4.61393 0.0 12.1427    
cufflinks 3.27403 0.0 8.87345    
cufflinks 2.06106 0.0 5.89277    
cufflinks 4.08065 0.0 10.967    

0 Strain