Gene : Eucgr.F02827 E. grandis v2.0
Defline:  (1 of 1) PTHR13206 - UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN Genomic Order:  2491
Name:  ? Eucgr.F02827 Secondary Identifier:  ? PAC:32052689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02827 0.5kb upstream 0.5kb upstream 5463 true Chr06: 40458364-40463826 Eucalyptus grandis
Eucgr.F02827 0.5kb upstream 0.5kb upstream 500 false Chr06: 40463327-40463826 Eucalyptus grandis
Eucgr.F02827 0.5kb downstream 0.5kb downstream 5463 true Chr06: 40457864-40463326 Eucalyptus grandis
Eucgr.F02827 0.5kb downstream 0.5kb downstream 500 false Chr06: 40457864-40458363 Eucalyptus grandis
Eucgr.F02827 1.0kb upstream 1.0kb upstream 5963 true Chr06: 40458364-40464326 Eucalyptus grandis
Eucgr.F02827 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40463327-40464326 Eucalyptus grandis
Eucgr.F02827 1.0kb downstream 1.0kb downstream 5963 true Chr06: 40457364-40463326 Eucalyptus grandis
Eucgr.F02827 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40457364-40458363 Eucalyptus grandis
Eucgr.F02827 2.0kb upstream 2.0kb upstream 6963 true Chr06: 40458364-40465326 Eucalyptus grandis
Eucgr.F02827 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40463327-40465326 Eucalyptus grandis
Eucgr.F02827 2.0kb downstream 2.0kb downstream 6963 true Chr06: 40456364-40463326 Eucalyptus grandis
Eucgr.F02827 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40456364-40458363 Eucalyptus grandis
Eucgr.F02827 5.0kb upstream 5.0kb upstream 9963 true Chr06: 40458364-40468326 Eucalyptus grandis
Eucgr.F02827 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40463327-40468326 Eucalyptus grandis
Eucgr.F02827 5.0kb downstream 5.0kb downstream 9963 true Chr06: 40453364-40463326 Eucalyptus grandis
Eucgr.F02827 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40453364-40458363 Eucalyptus grandis
Eucgr.F02827 10.0kb upstream 10.0kb upstream 14963 true Chr06: 40458364-40473326 Eucalyptus grandis
Eucgr.F02827 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40463327-40473326 Eucalyptus grandis
Eucgr.F02827 10.0kb downstream 10.0kb downstream 14963 true Chr06: 40448364-40463326 Eucalyptus grandis
Eucgr.F02827 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40448364-40458363 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040943 5273 Angiosperm View MSA
124050532 5270 Rosid View MSA
123739121 5271 Pentapetalae View MSA
122791558 5272 Eudicot View MSA
121344260 5274 Embryophyte View MSA
123423854 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.84259 0.0 12.8912    
cufflinks 3.89506 0.0 10.4765    
cufflinks 1.4754 0.0 4.42882    
cufflinks 2.70959 0.0 7.57653    
cufflinks 0.574061 0.0 1.94341 Low Low
cufflinks 4.84576 0.0 13.0233    

0 Strain