Gene : Eucgr.F02720 E. grandis v2.0
Defline:  (1 of 1) PTHR22849//PTHR22849:SF12 - WDSAM1 PROTEIN Genomic Order:  2390
Name:  ? Eucgr.F02720 Secondary Identifier:  ? PAC:32055020
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02720 0.5kb upstream 0.5kb upstream 1841 true Chr06: 39326186-39328026 Eucalyptus grandis
Eucgr.F02720 0.5kb upstream 0.5kb upstream 500 false Chr06: 39326186-39326685 Eucalyptus grandis
Eucgr.F02720 0.5kb downstream 0.5kb downstream 1841 true Chr06: 39326686-39328526 Eucalyptus grandis
Eucgr.F02720 0.5kb downstream 0.5kb downstream 500 false Chr06: 39328027-39328526 Eucalyptus grandis
Eucgr.F02720 1.0kb upstream 1.0kb upstream 2341 true Chr06: 39325686-39328026 Eucalyptus grandis
Eucgr.F02720 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39325686-39326685 Eucalyptus grandis
Eucgr.F02720 1.0kb downstream 1.0kb downstream 2341 true Chr06: 39326686-39329026 Eucalyptus grandis
Eucgr.F02720 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39328027-39329026 Eucalyptus grandis
Eucgr.F02720 2.0kb upstream 2.0kb upstream 3341 true Chr06: 39324686-39328026 Eucalyptus grandis
Eucgr.F02720 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39324686-39326685 Eucalyptus grandis
Eucgr.F02720 2.0kb downstream 2.0kb downstream 3341 true Chr06: 39326686-39330026 Eucalyptus grandis
Eucgr.F02720 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39328027-39330026 Eucalyptus grandis
Eucgr.F02720 5.0kb upstream 5.0kb upstream 6341 true Chr06: 39321686-39328026 Eucalyptus grandis
Eucgr.F02720 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39321686-39326685 Eucalyptus grandis
Eucgr.F02720 5.0kb downstream 5.0kb downstream 6341 true Chr06: 39326686-39333026 Eucalyptus grandis
Eucgr.F02720 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39328027-39333026 Eucalyptus grandis
Eucgr.F02720 10.0kb upstream 10.0kb upstream 11341 true Chr06: 39316686-39328026 Eucalyptus grandis
Eucgr.F02720 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39316686-39326685 Eucalyptus grandis
Eucgr.F02720 10.0kb downstream 10.0kb downstream 11341 true Chr06: 39326686-39338026 Eucalyptus grandis
Eucgr.F02720 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39328027-39338026 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.4292 0.0 131.616 High  
cufflinks 57.5115 0.0 127.21 High  
cufflinks 74.7215 0.0 165.761 High High
cufflinks 20.9642 0.0 47.8643   Low
cufflinks 46.2748 0.0 102.387 High  
cufflinks 34.5175 0.0 76.4566 High  

0 Strain