Gene : Eucgr.F03416 E. grandis v2.0
Defline:  (1 of 1) PTHR12903:SF1 - 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC Genomic Order:  3038
Name:  ? Eucgr.F03416 Secondary Identifier:  ? PAC:32056341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03416 0.5kb upstream 0.5kb upstream 3267 true Chr06: 45676845-45680111 Eucalyptus grandis
Eucgr.F03416 0.5kb upstream 0.5kb upstream 500 false Chr06: 45676845-45677344 Eucalyptus grandis
Eucgr.F03416 0.5kb downstream 0.5kb downstream 3267 true Chr06: 45677345-45680611 Eucalyptus grandis
Eucgr.F03416 0.5kb downstream 0.5kb downstream 500 false Chr06: 45680112-45680611 Eucalyptus grandis
Eucgr.F03416 1.0kb upstream 1.0kb upstream 3767 true Chr06: 45676345-45680111 Eucalyptus grandis
Eucgr.F03416 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45676345-45677344 Eucalyptus grandis
Eucgr.F03416 1.0kb downstream 1.0kb downstream 3767 true Chr06: 45677345-45681111 Eucalyptus grandis
Eucgr.F03416 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45680112-45681111 Eucalyptus grandis
Eucgr.F03416 2.0kb upstream 2.0kb upstream 4767 true Chr06: 45675345-45680111 Eucalyptus grandis
Eucgr.F03416 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45675345-45677344 Eucalyptus grandis
Eucgr.F03416 2.0kb downstream 2.0kb downstream 4767 true Chr06: 45677345-45682111 Eucalyptus grandis
Eucgr.F03416 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45680112-45682111 Eucalyptus grandis
Eucgr.F03416 5.0kb upstream 5.0kb upstream 7767 true Chr06: 45672345-45680111 Eucalyptus grandis
Eucgr.F03416 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45672345-45677344 Eucalyptus grandis
Eucgr.F03416 5.0kb downstream 5.0kb downstream 7767 true Chr06: 45677345-45685111 Eucalyptus grandis
Eucgr.F03416 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45680112-45685111 Eucalyptus grandis
Eucgr.F03416 10.0kb upstream 10.0kb upstream 12767 true Chr06: 45667345-45680111 Eucalyptus grandis
Eucgr.F03416 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45667345-45677344 Eucalyptus grandis
Eucgr.F03416 10.0kb downstream 10.0kb downstream 12767 true Chr06: 45677345-45690111 Eucalyptus grandis
Eucgr.F03416 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45680112-45690111 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064629 5270 Rosid View MSA
123738046 5271 Pentapetalae View MSA
122791354 5272 Eudicot View MSA
122043380 5273 Angiosperm View MSA
121346422 5274 Embryophyte View MSA
123426364 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.9662 0.0 83.2873 High  
cufflinks 17.9439 0.0 41.3761    
cufflinks 28.4466 0.0 65.2776 High  
cufflinks 7.47964 0.0 18.9685   Low
cufflinks 13.2769 0.0 31.2884    
cufflinks 88.8974 0.0 204.984 High High

0 Strain