Gene : Eucgr.F03394 E. grandis v2.0
Defline:  (1 of 1) PTHR10353:SF46 - BETA-GLUCOSIDASE 41-RELATED Genomic Order:  3024
Name:  ? Eucgr.F03394 Secondary Identifier:  ? PAC:32056487
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5176 Eucalyptus grandis pathologic  
Egrandis PWY-7089 Eucalyptus grandis pathologic  
Egrandis PWY-7091 Eucalyptus grandis pathologic  
Egrandis PWY-7092 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03394 0.5kb upstream 0.5kb upstream 4238 true Chr06: 45298382-45302619 Eucalyptus grandis
Eucgr.F03394 0.5kb upstream 0.5kb upstream 500 false Chr06: 45302120-45302619 Eucalyptus grandis
Eucgr.F03394 0.5kb downstream 0.5kb downstream 4238 true Chr06: 45297882-45302119 Eucalyptus grandis
Eucgr.F03394 0.5kb downstream 0.5kb downstream 500 false Chr06: 45297882-45298381 Eucalyptus grandis
Eucgr.F03394 1.0kb upstream 1.0kb upstream 4738 true Chr06: 45298382-45303119 Eucalyptus grandis
Eucgr.F03394 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45302120-45303119 Eucalyptus grandis
Eucgr.F03394 1.0kb downstream 1.0kb downstream 4738 true Chr06: 45297382-45302119 Eucalyptus grandis
Eucgr.F03394 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45297382-45298381 Eucalyptus grandis
Eucgr.F03394 2.0kb upstream 2.0kb upstream 5738 true Chr06: 45298382-45304119 Eucalyptus grandis
Eucgr.F03394 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45302120-45304119 Eucalyptus grandis
Eucgr.F03394 2.0kb downstream 2.0kb downstream 5738 true Chr06: 45296382-45302119 Eucalyptus grandis
Eucgr.F03394 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45296382-45298381 Eucalyptus grandis
Eucgr.F03394 5.0kb upstream 5.0kb upstream 8738 true Chr06: 45298382-45307119 Eucalyptus grandis
Eucgr.F03394 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45302120-45307119 Eucalyptus grandis
Eucgr.F03394 5.0kb downstream 5.0kb downstream 8738 true Chr06: 45293382-45302119 Eucalyptus grandis
Eucgr.F03394 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45293382-45298381 Eucalyptus grandis
Eucgr.F03394 10.0kb upstream 10.0kb upstream 13738 true Chr06: 45298382-45312119 Eucalyptus grandis
Eucgr.F03394 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45302120-45312119 Eucalyptus grandis
Eucgr.F03394 10.0kb downstream 10.0kb downstream 13738 true Chr06: 45288382-45302119 Eucalyptus grandis
Eucgr.F03394 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45288382-45298381 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063418 5270 Rosid View MSA
123738242 5271 Pentapetalae View MSA
122788523 5272 Eudicot View MSA
122050283 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.563581 0.0 1.67142   Low
cufflinks 25.7879 0.0 57.1187   High
cufflinks 0.798534 0.0 2.27065    
cufflinks 4.69892 0.0 11.1612    
cufflinks 6.2235 0.0 14.4626    
cufflinks 0.908362 0.0 2.57045    

0 Strain