Gene : Eucgr.F03326 E. grandis v2.0
Defline:  (1 of 503) PF01535 - PPR repeat (PPR) Genomic Order:  2961
Name:  ? Eucgr.F03326 Secondary Identifier:  ? PAC:32054107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03326 0.5kb upstream 0.5kb upstream 3797 true Chr06: 44725077-44728873 Eucalyptus grandis
Eucgr.F03326 0.5kb upstream 0.5kb upstream 500 false Chr06: 44725077-44725576 Eucalyptus grandis
Eucgr.F03326 0.5kb downstream 0.5kb downstream 3797 true Chr06: 44725577-44729373 Eucalyptus grandis
Eucgr.F03326 0.5kb downstream 0.5kb downstream 500 false Chr06: 44728874-44729373 Eucalyptus grandis
Eucgr.F03326 1.0kb upstream 1.0kb upstream 4297 true Chr06: 44724577-44728873 Eucalyptus grandis
Eucgr.F03326 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44724577-44725576 Eucalyptus grandis
Eucgr.F03326 1.0kb downstream 1.0kb downstream 4297 true Chr06: 44725577-44729873 Eucalyptus grandis
Eucgr.F03326 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44728874-44729873 Eucalyptus grandis
Eucgr.F03326 2.0kb upstream 2.0kb upstream 5297 true Chr06: 44723577-44728873 Eucalyptus grandis
Eucgr.F03326 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44723577-44725576 Eucalyptus grandis
Eucgr.F03326 2.0kb downstream 2.0kb downstream 5297 true Chr06: 44725577-44730873 Eucalyptus grandis
Eucgr.F03326 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44728874-44730873 Eucalyptus grandis
Eucgr.F03326 5.0kb upstream 5.0kb upstream 8297 true Chr06: 44720577-44728873 Eucalyptus grandis
Eucgr.F03326 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44720577-44725576 Eucalyptus grandis
Eucgr.F03326 5.0kb downstream 5.0kb downstream 8297 true Chr06: 44725577-44733873 Eucalyptus grandis
Eucgr.F03326 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44728874-44733873 Eucalyptus grandis
Eucgr.F03326 10.0kb upstream 10.0kb upstream 13297 true Chr06: 44715577-44728873 Eucalyptus grandis
Eucgr.F03326 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44715577-44725576 Eucalyptus grandis
Eucgr.F03326 10.0kb downstream 10.0kb downstream 13297 true Chr06: 44725577-44738873 Eucalyptus grandis
Eucgr.F03326 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44728874-44738873 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072029 5270 Rosid View MSA
123744765 5271 Pentapetalae View MSA
122790014 5272 Eudicot View MSA
122049142 5273 Angiosperm View MSA
121311265 5274 Embryophyte View MSA
123348580 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.14896 0.0 5.57991   Low
cufflinks 6.34522 0.0 14.7257    
cufflinks 3.1057 0.0 7.74361    
cufflinks 10.296 0.0 23.1701    
cufflinks 22.7583 0.0 50.3286   High
cufflinks 2.86109 0.0 7.25829    

0 Strain