Gene : Eucgr.F03312 E. grandis v2.0
Defline:  (1 of 3) PTHR32219:SF2 - PROTON PUMP-INTERACTOR 1-RELATED Genomic Order:  2949
Name:  ? Eucgr.F03312 Secondary Identifier:  ? PAC:32057754
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03312 0.5kb upstream 0.5kb upstream 2198 true Chr06: 44642671-44644868 Eucalyptus grandis
Eucgr.F03312 0.5kb upstream 0.5kb upstream 500 false Chr06: 44644369-44644868 Eucalyptus grandis
Eucgr.F03312 0.5kb downstream 0.5kb downstream 2198 true Chr06: 44642171-44644368 Eucalyptus grandis
Eucgr.F03312 0.5kb downstream 0.5kb downstream 500 false Chr06: 44642171-44642670 Eucalyptus grandis
Eucgr.F03312 1.0kb upstream 1.0kb upstream 2698 true Chr06: 44642671-44645368 Eucalyptus grandis
Eucgr.F03312 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44644369-44645368 Eucalyptus grandis
Eucgr.F03312 1.0kb downstream 1.0kb downstream 2698 true Chr06: 44641671-44644368 Eucalyptus grandis
Eucgr.F03312 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44641671-44642670 Eucalyptus grandis
Eucgr.F03312 2.0kb upstream 2.0kb upstream 3698 true Chr06: 44642671-44646368 Eucalyptus grandis
Eucgr.F03312 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44644369-44646368 Eucalyptus grandis
Eucgr.F03312 2.0kb downstream 2.0kb downstream 3698 true Chr06: 44640671-44644368 Eucalyptus grandis
Eucgr.F03312 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44640671-44642670 Eucalyptus grandis
Eucgr.F03312 5.0kb upstream 5.0kb upstream 6698 true Chr06: 44642671-44649368 Eucalyptus grandis
Eucgr.F03312 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44644369-44649368 Eucalyptus grandis
Eucgr.F03312 5.0kb downstream 5.0kb downstream 6698 true Chr06: 44637671-44644368 Eucalyptus grandis
Eucgr.F03312 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44637671-44642670 Eucalyptus grandis
Eucgr.F03312 10.0kb upstream 10.0kb upstream 11698 true Chr06: 44642671-44654368 Eucalyptus grandis
Eucgr.F03312 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44644369-44654368 Eucalyptus grandis
Eucgr.F03312 10.0kb downstream 10.0kb downstream 11698 true Chr06: 44632671-44644368 Eucalyptus grandis
Eucgr.F03312 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44632671-44642670 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029387 5273 Angiosperm View MSA
124051424 5270 Rosid View MSA
123620155 5271 Pentapetalae View MSA
122654571 5272 Eudicot View MSA
121298725 5274 Embryophyte View MSA
123336676 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.3218 0.0 97.6275 High  
cufflinks 34.9596 0.0 86.5978    
cufflinks 28.8717 0.0 69.1161 High Low
cufflinks 42.2968 0.0 100.567 High High
cufflinks 31.1401 0.0 81.339    
cufflinks 39.6579 0.0 106.885 High  

0 Strain