Gene : Eucgr.F03336 E. grandis v2.0
Defline:  (1 of 2) PTHR12736//PTHR12736:SF13 - LANC-LIKE PROTEIN Genomic Order:  2971
Name:  ? Eucgr.F03336 Secondary Identifier:  ? PAC:32054932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03336 0.5kb upstream 0.5kb upstream 3394 true Chr06: 44809578-44812971 Eucalyptus grandis
Eucgr.F03336 0.5kb upstream 0.5kb upstream 500 false Chr06: 44809578-44810077 Eucalyptus grandis
Eucgr.F03336 0.5kb downstream 0.5kb downstream 3394 true Chr06: 44810078-44813471 Eucalyptus grandis
Eucgr.F03336 0.5kb downstream 0.5kb downstream 500 false Chr06: 44812972-44813471 Eucalyptus grandis
Eucgr.F03336 1.0kb upstream 1.0kb upstream 3894 true Chr06: 44809078-44812971 Eucalyptus grandis
Eucgr.F03336 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44809078-44810077 Eucalyptus grandis
Eucgr.F03336 1.0kb downstream 1.0kb downstream 3894 true Chr06: 44810078-44813971 Eucalyptus grandis
Eucgr.F03336 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44812972-44813971 Eucalyptus grandis
Eucgr.F03336 2.0kb upstream 2.0kb upstream 4894 true Chr06: 44808078-44812971 Eucalyptus grandis
Eucgr.F03336 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44808078-44810077 Eucalyptus grandis
Eucgr.F03336 2.0kb downstream 2.0kb downstream 4894 true Chr06: 44810078-44814971 Eucalyptus grandis
Eucgr.F03336 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44812972-44814971 Eucalyptus grandis
Eucgr.F03336 5.0kb upstream 5.0kb upstream 7894 true Chr06: 44805078-44812971 Eucalyptus grandis
Eucgr.F03336 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44805078-44810077 Eucalyptus grandis
Eucgr.F03336 5.0kb downstream 5.0kb downstream 7894 true Chr06: 44810078-44817971 Eucalyptus grandis
Eucgr.F03336 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44812972-44817971 Eucalyptus grandis
Eucgr.F03336 10.0kb upstream 10.0kb upstream 12894 true Chr06: 44800078-44812971 Eucalyptus grandis
Eucgr.F03336 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44800078-44810077 Eucalyptus grandis
Eucgr.F03336 10.0kb downstream 10.0kb downstream 12894 true Chr06: 44810078-44822971 Eucalyptus grandis
Eucgr.F03336 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44812972-44822971 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065113 5270 Rosid View MSA
123737530 5271 Pentapetalae View MSA
122788012 5272 Eudicot View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.89747 0.0 16.4955    
cufflinks 8.51315 0.0 19.9058    
cufflinks 8.27289 0.0 19.4074    
cufflinks 4.49971 0.0 11.1506   Low
cufflinks 9.76843 0.0 22.6463   High
cufflinks 4.78592 0.0 11.8949   Low

0 Strain