Gene : Eucgr.F03230 E. grandis v2.0
Defline:  (1 of 2) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 Genomic Order:  2873
Name:  ? Eucgr.F03230 Secondary Identifier:  ? PAC:32053298
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03230 0.5kb upstream 0.5kb upstream 3280 true Chr06: 43995739-43999018 Eucalyptus grandis
Eucgr.F03230 0.5kb upstream 0.5kb upstream 500 false Chr06: 43998519-43999018 Eucalyptus grandis
Eucgr.F03230 0.5kb downstream 0.5kb downstream 3280 true Chr06: 43995239-43998518 Eucalyptus grandis
Eucgr.F03230 0.5kb downstream 0.5kb downstream 500 false Chr06: 43995239-43995738 Eucalyptus grandis
Eucgr.F03230 1.0kb upstream 1.0kb upstream 3780 true Chr06: 43995739-43999518 Eucalyptus grandis
Eucgr.F03230 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43998519-43999518 Eucalyptus grandis
Eucgr.F03230 1.0kb downstream 1.0kb downstream 3780 true Chr06: 43994739-43998518 Eucalyptus grandis
Eucgr.F03230 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43994739-43995738 Eucalyptus grandis
Eucgr.F03230 2.0kb upstream 2.0kb upstream 4780 true Chr06: 43995739-44000518 Eucalyptus grandis
Eucgr.F03230 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43998519-44000518 Eucalyptus grandis
Eucgr.F03230 2.0kb downstream 2.0kb downstream 4780 true Chr06: 43993739-43998518 Eucalyptus grandis
Eucgr.F03230 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43993739-43995738 Eucalyptus grandis
Eucgr.F03230 5.0kb upstream 5.0kb upstream 7780 true Chr06: 43995739-44003518 Eucalyptus grandis
Eucgr.F03230 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43998519-44003518 Eucalyptus grandis
Eucgr.F03230 5.0kb downstream 5.0kb downstream 7780 true Chr06: 43990739-43998518 Eucalyptus grandis
Eucgr.F03230 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43990739-43995738 Eucalyptus grandis
Eucgr.F03230 10.0kb upstream 10.0kb upstream 12780 true Chr06: 43995739-44008518 Eucalyptus grandis
Eucgr.F03230 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43998519-44008518 Eucalyptus grandis
Eucgr.F03230 10.0kb downstream 10.0kb downstream 12780 true Chr06: 43985739-43998518 Eucalyptus grandis
Eucgr.F03230 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43985739-43995738 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072962 5270 Rosid View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.1671 0.0 53.7085    
cufflinks 6.58008 0.0 16.5814    
cufflinks 15.7777 0.0 43.0773    
cufflinks 13.4644 0.0 31.1071    
cufflinks 1.9823 0.0 6.06584   Low
cufflinks 14.2071 0.0 33.2077    

0 Strain