Gene : Eucgr.F03233 E. grandis v2.0
Defline:  (1 of 2) PTHR20275:SF2 - NADH KINASE Genomic Order:  2876
Name:  ? Eucgr.F03233 Secondary Identifier:  ? PAC:32053612
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5083 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03233 0.5kb upstream 0.5kb upstream 3123 true Chr06: 44068288-44071410 Eucalyptus grandis
Eucgr.F03233 0.5kb upstream 0.5kb upstream 500 false Chr06: 44068288-44068787 Eucalyptus grandis
Eucgr.F03233 0.5kb downstream 0.5kb downstream 3123 true Chr06: 44068788-44071910 Eucalyptus grandis
Eucgr.F03233 0.5kb downstream 0.5kb downstream 500 false Chr06: 44071411-44071910 Eucalyptus grandis
Eucgr.F03233 1.0kb upstream 1.0kb upstream 3623 true Chr06: 44067788-44071410 Eucalyptus grandis
Eucgr.F03233 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44067788-44068787 Eucalyptus grandis
Eucgr.F03233 1.0kb downstream 1.0kb downstream 3623 true Chr06: 44068788-44072410 Eucalyptus grandis
Eucgr.F03233 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44071411-44072410 Eucalyptus grandis
Eucgr.F03233 2.0kb upstream 2.0kb upstream 4623 true Chr06: 44066788-44071410 Eucalyptus grandis
Eucgr.F03233 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44066788-44068787 Eucalyptus grandis
Eucgr.F03233 2.0kb downstream 2.0kb downstream 4623 true Chr06: 44068788-44073410 Eucalyptus grandis
Eucgr.F03233 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44071411-44073410 Eucalyptus grandis
Eucgr.F03233 5.0kb upstream 5.0kb upstream 7623 true Chr06: 44063788-44071410 Eucalyptus grandis
Eucgr.F03233 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44063788-44068787 Eucalyptus grandis
Eucgr.F03233 5.0kb downstream 5.0kb downstream 7623 true Chr06: 44068788-44076410 Eucalyptus grandis
Eucgr.F03233 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44071411-44076410 Eucalyptus grandis
Eucgr.F03233 10.0kb upstream 10.0kb upstream 12623 true Chr06: 44058788-44071410 Eucalyptus grandis
Eucgr.F03233 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44058788-44068787 Eucalyptus grandis
Eucgr.F03233 10.0kb downstream 10.0kb downstream 12623 true Chr06: 44068788-44081410 Eucalyptus grandis
Eucgr.F03233 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44071411-44081410 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067358 5270 Rosid View MSA
123747292 5271 Pentapetalae View MSA
122792371 5272 Eudicot View MSA
122049268 5273 Angiosperm View MSA
121346179 5274 Embryophyte View MSA
123425212 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.10004 0.0 17.2699    
cufflinks 2.46886 0.0 6.64047   Low
cufflinks 4.75114 0.0 12.0223    
cufflinks 9.19476 0.0 21.7382   High
cufflinks 3.46438 0.0 9.03757    
cufflinks 8.15472 0.0 19.6485    

0 Strain