Gene : Eucgr.F03219 E. grandis v2.0
Defline:  (1 of 1) 2.5.1.30 - Heptaprenyl diphosphate synthase / Trans-hexaprenyltranstransferase Genomic Order:  2863
Name:  ? Eucgr.F03219 Secondary Identifier:  ? PAC:32057646
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis HEXPPSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5120 Eucalyptus grandis pathologic  
Egrandis PWY-5783 Eucalyptus grandis pathologic  
Egrandis PWY-5805 Eucalyptus grandis pathologic  
Egrandis PWY-5807 Eucalyptus grandis pathologic  
Egrandis PWY-5910 Eucalyptus grandis pathologic  
Egrandis PWY-6520 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03219 0.5kb upstream 0.5kb upstream 4223 true Chr06: 43945436-43949658 Eucalyptus grandis
Eucgr.F03219 0.5kb upstream 0.5kb upstream 500 false Chr06: 43949159-43949658 Eucalyptus grandis
Eucgr.F03219 0.5kb downstream 0.5kb downstream 4223 true Chr06: 43944936-43949158 Eucalyptus grandis
Eucgr.F03219 0.5kb downstream 0.5kb downstream 500 false Chr06: 43944936-43945435 Eucalyptus grandis
Eucgr.F03219 1.0kb upstream 1.0kb upstream 4723 true Chr06: 43945436-43950158 Eucalyptus grandis
Eucgr.F03219 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43949159-43950158 Eucalyptus grandis
Eucgr.F03219 1.0kb downstream 1.0kb downstream 4723 true Chr06: 43944436-43949158 Eucalyptus grandis
Eucgr.F03219 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43944436-43945435 Eucalyptus grandis
Eucgr.F03219 2.0kb upstream 2.0kb upstream 5723 true Chr06: 43945436-43951158 Eucalyptus grandis
Eucgr.F03219 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43949159-43951158 Eucalyptus grandis
Eucgr.F03219 2.0kb downstream 2.0kb downstream 5723 true Chr06: 43943436-43949158 Eucalyptus grandis
Eucgr.F03219 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43943436-43945435 Eucalyptus grandis
Eucgr.F03219 5.0kb upstream 5.0kb upstream 8723 true Chr06: 43945436-43954158 Eucalyptus grandis
Eucgr.F03219 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43949159-43954158 Eucalyptus grandis
Eucgr.F03219 5.0kb downstream 5.0kb downstream 8723 true Chr06: 43940436-43949158 Eucalyptus grandis
Eucgr.F03219 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43940436-43945435 Eucalyptus grandis
Eucgr.F03219 10.0kb upstream 10.0kb upstream 13723 true Chr06: 43945436-43959158 Eucalyptus grandis
Eucgr.F03219 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43949159-43959158 Eucalyptus grandis
Eucgr.F03219 10.0kb downstream 10.0kb downstream 13723 true Chr06: 43935436-43949158 Eucalyptus grandis
Eucgr.F03219 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43935436-43945435 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
124065347 5270 Rosid View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.06928 0.0 8.01322    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.36342 0.0 10.6332    
cufflinks 0.915162 0.0 2.90503    
cufflinks 0.22131 0.0 0.918253 Low Low
cufflinks 9.01991 0.0 20.7842   High

0 Strain