Gene : Eucgr.F03104 E. grandis v2.0
Defline:  (1 of 1) PF00240//PF13423 - Ubiquitin family (ubiquitin) // Ubiquitin carboxyl-terminal hydrolase (UCH_1) Genomic Order:  2756
Name:  ? Eucgr.F03104 Secondary Identifier:  ? PAC:32052679
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03104 0.5kb upstream 0.5kb upstream 9745 true Chr06: 42867388-42877132 Eucalyptus grandis
Eucgr.F03104 0.5kb upstream 0.5kb upstream 500 false Chr06: 42867388-42867887 Eucalyptus grandis
Eucgr.F03104 0.5kb downstream 0.5kb downstream 9745 true Chr06: 42867888-42877632 Eucalyptus grandis
Eucgr.F03104 0.5kb downstream 0.5kb downstream 500 false Chr06: 42877133-42877632 Eucalyptus grandis
Eucgr.F03104 1.0kb upstream 1.0kb upstream 10245 true Chr06: 42866888-42877132 Eucalyptus grandis
Eucgr.F03104 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42866888-42867887 Eucalyptus grandis
Eucgr.F03104 1.0kb downstream 1.0kb downstream 10245 true Chr06: 42867888-42878132 Eucalyptus grandis
Eucgr.F03104 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42877133-42878132 Eucalyptus grandis
Eucgr.F03104 2.0kb upstream 2.0kb upstream 11245 true Chr06: 42865888-42877132 Eucalyptus grandis
Eucgr.F03104 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42865888-42867887 Eucalyptus grandis
Eucgr.F03104 2.0kb downstream 2.0kb downstream 11245 true Chr06: 42867888-42879132 Eucalyptus grandis
Eucgr.F03104 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42877133-42879132 Eucalyptus grandis
Eucgr.F03104 5.0kb upstream 5.0kb upstream 14245 true Chr06: 42862888-42877132 Eucalyptus grandis
Eucgr.F03104 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42862888-42867887 Eucalyptus grandis
Eucgr.F03104 5.0kb downstream 5.0kb downstream 14245 true Chr06: 42867888-42882132 Eucalyptus grandis
Eucgr.F03104 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42877133-42882132 Eucalyptus grandis
Eucgr.F03104 10.0kb upstream 10.0kb upstream 19245 true Chr06: 42857888-42877132 Eucalyptus grandis
Eucgr.F03104 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42857888-42867887 Eucalyptus grandis
Eucgr.F03104 10.0kb downstream 10.0kb downstream 19245 true Chr06: 42867888-42887132 Eucalyptus grandis
Eucgr.F03104 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42877133-42887132 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066467 5270 Rosid View MSA
123739899 5271 Pentapetalae View MSA
122787327 5272 Eudicot View MSA
122042667 5273 Angiosperm View MSA
121345593 5274 Embryophyte View MSA
123424639 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6655 0.0 58.973    
cufflinks 30.901 0.0 68.4863    
cufflinks 27.6264 0.0 61.1216 High  
cufflinks 49.6886 0.0 111.847 High High
cufflinks 31.8188 0.0 70.5176    
cufflinks 25.6641 0.0 56.7587    

0 Strain