Gene : Eucgr.F03640 E. grandis v2.0
Defline:  (1 of 1) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 Genomic Order:  3239
Name:  ? Eucgr.F03640 Secondary Identifier:  ? PAC:32056285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03640 0.5kb upstream 0.5kb upstream 5447 true Chr06: 47271541-47276987 Eucalyptus grandis
Eucgr.F03640 0.5kb upstream 0.5kb upstream 500 false Chr06: 47271541-47272040 Eucalyptus grandis
Eucgr.F03640 0.5kb downstream 0.5kb downstream 5447 true Chr06: 47272041-47277487 Eucalyptus grandis
Eucgr.F03640 0.5kb downstream 0.5kb downstream 500 false Chr06: 47276988-47277487 Eucalyptus grandis
Eucgr.F03640 1.0kb upstream 1.0kb upstream 5947 true Chr06: 47271041-47276987 Eucalyptus grandis
Eucgr.F03640 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47271041-47272040 Eucalyptus grandis
Eucgr.F03640 1.0kb downstream 1.0kb downstream 5947 true Chr06: 47272041-47277987 Eucalyptus grandis
Eucgr.F03640 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47276988-47277987 Eucalyptus grandis
Eucgr.F03640 2.0kb upstream 2.0kb upstream 6947 true Chr06: 47270041-47276987 Eucalyptus grandis
Eucgr.F03640 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47270041-47272040 Eucalyptus grandis
Eucgr.F03640 2.0kb downstream 2.0kb downstream 6947 true Chr06: 47272041-47278987 Eucalyptus grandis
Eucgr.F03640 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47276988-47278987 Eucalyptus grandis
Eucgr.F03640 5.0kb upstream 5.0kb upstream 9947 true Chr06: 47267041-47276987 Eucalyptus grandis
Eucgr.F03640 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47267041-47272040 Eucalyptus grandis
Eucgr.F03640 5.0kb downstream 5.0kb downstream 9947 true Chr06: 47272041-47281987 Eucalyptus grandis
Eucgr.F03640 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47276988-47281987 Eucalyptus grandis
Eucgr.F03640 10.0kb upstream 10.0kb upstream 14947 true Chr06: 47262041-47276987 Eucalyptus grandis
Eucgr.F03640 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47262041-47272040 Eucalyptus grandis
Eucgr.F03640 10.0kb downstream 10.0kb downstream 14947 true Chr06: 47272041-47286987 Eucalyptus grandis
Eucgr.F03640 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47276988-47286987 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066066 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.1821 0.0 51.7938   Low
cufflinks 39.0757 0.0 86.4157   High
cufflinks 31.1804 0.0 69.1756 High  
cufflinks 31.1699 0.0 69.1408    
cufflinks 26.4191 0.0 58.7669    
cufflinks 27.3454 0.0 60.7843    

0 Strain