Gene : Eucgr.F03624 E. grandis v2.0
Defline:  (1 of 1) PTHR15704 - SUPERKILLER 3 PROTEIN-RELATED Genomic Order:  3227
Name:  ? Eucgr.F03624 Secondary Identifier:  ? PAC:32056631
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03624 0.5kb upstream 0.5kb upstream 12865 true Chr06: 47131198-47144062 Eucalyptus grandis
Eucgr.F03624 0.5kb upstream 0.5kb upstream 500 false Chr06: 47131198-47131697 Eucalyptus grandis
Eucgr.F03624 0.5kb downstream 0.5kb downstream 12865 true Chr06: 47131698-47144562 Eucalyptus grandis
Eucgr.F03624 0.5kb downstream 0.5kb downstream 500 false Chr06: 47144063-47144562 Eucalyptus grandis
Eucgr.F03624 1.0kb upstream 1.0kb upstream 13365 true Chr06: 47130698-47144062 Eucalyptus grandis
Eucgr.F03624 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47130698-47131697 Eucalyptus grandis
Eucgr.F03624 1.0kb downstream 1.0kb downstream 13365 true Chr06: 47131698-47145062 Eucalyptus grandis
Eucgr.F03624 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47144063-47145062 Eucalyptus grandis
Eucgr.F03624 2.0kb upstream 2.0kb upstream 14365 true Chr06: 47129698-47144062 Eucalyptus grandis
Eucgr.F03624 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47129698-47131697 Eucalyptus grandis
Eucgr.F03624 2.0kb downstream 2.0kb downstream 14365 true Chr06: 47131698-47146062 Eucalyptus grandis
Eucgr.F03624 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47144063-47146062 Eucalyptus grandis
Eucgr.F03624 5.0kb upstream 5.0kb upstream 17365 true Chr06: 47126698-47144062 Eucalyptus grandis
Eucgr.F03624 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47126698-47131697 Eucalyptus grandis
Eucgr.F03624 5.0kb downstream 5.0kb downstream 17365 true Chr06: 47131698-47149062 Eucalyptus grandis
Eucgr.F03624 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47144063-47149062 Eucalyptus grandis
Eucgr.F03624 10.0kb upstream 10.0kb upstream 22365 true Chr06: 47121698-47144062 Eucalyptus grandis
Eucgr.F03624 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47121698-47131697 Eucalyptus grandis
Eucgr.F03624 10.0kb downstream 10.0kb downstream 22365 true Chr06: 47131698-47154062 Eucalyptus grandis
Eucgr.F03624 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47144063-47154062 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063123 5270 Rosid View MSA
123737260 5271 Pentapetalae View MSA
122791568 5272 Eudicot View MSA
122046967 5273 Angiosperm View MSA
121344761 5274 Embryophyte View MSA
123425993 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.87104 0.0 11.0718    
cufflinks 4.32128 0.0 9.85909    
cufflinks 5.26982 0.0 11.8977    
cufflinks 3.69322 0.0 8.50798   Low
cufflinks 5.18879 0.0 11.7319    
cufflinks 5.88705 0.0 13.2751   High

0 Strain