Gene : Eucgr.F04116 E. grandis v2.0
Defline:  (1 of 2) PTHR10024:SF197 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  3665
Name:  ? Eucgr.F04116 Secondary Identifier:  ? PAC:32057767
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04116 0.5kb upstream 0.5kb upstream 4157 true Chr06: 51890186-51894342 Eucalyptus grandis
Eucgr.F04116 0.5kb upstream 0.5kb upstream 500 false Chr06: 51890186-51890685 Eucalyptus grandis
Eucgr.F04116 0.5kb downstream 0.5kb downstream 4157 true Chr06: 51890686-51894842 Eucalyptus grandis
Eucgr.F04116 0.5kb downstream 0.5kb downstream 500 false Chr06: 51894343-51894842 Eucalyptus grandis
Eucgr.F04116 1.0kb upstream 1.0kb upstream 4657 true Chr06: 51889686-51894342 Eucalyptus grandis
Eucgr.F04116 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51889686-51890685 Eucalyptus grandis
Eucgr.F04116 1.0kb downstream 1.0kb downstream 4657 true Chr06: 51890686-51895342 Eucalyptus grandis
Eucgr.F04116 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51894343-51895342 Eucalyptus grandis
Eucgr.F04116 2.0kb upstream 2.0kb upstream 5657 true Chr06: 51888686-51894342 Eucalyptus grandis
Eucgr.F04116 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51888686-51890685 Eucalyptus grandis
Eucgr.F04116 2.0kb downstream 2.0kb downstream 5657 true Chr06: 51890686-51896342 Eucalyptus grandis
Eucgr.F04116 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51894343-51896342 Eucalyptus grandis
Eucgr.F04116 5.0kb upstream 5.0kb upstream 8657 true Chr06: 51885686-51894342 Eucalyptus grandis
Eucgr.F04116 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51885686-51890685 Eucalyptus grandis
Eucgr.F04116 5.0kb downstream 5.0kb downstream 8657 true Chr06: 51890686-51899342 Eucalyptus grandis
Eucgr.F04116 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51894343-51899342 Eucalyptus grandis
Eucgr.F04116 10.0kb upstream 10.0kb upstream 13657 true Chr06: 51880686-51894342 Eucalyptus grandis
Eucgr.F04116 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51880686-51890685 Eucalyptus grandis
Eucgr.F04116 10.0kb downstream 10.0kb downstream 13657 true Chr06: 51890686-51904342 Eucalyptus grandis
Eucgr.F04116 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51894343-51904342 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026435 5273 Angiosperm View MSA
124063760 5270 Rosid View MSA
123752822 5271 Pentapetalae View MSA
122787154 5272 Eudicot View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.40794 0.0 14.4222    
cufflinks 22.6028 0.0 50.3309   High
cufflinks 7.83632 0.0 17.5201    
cufflinks 14.6498 0.0 32.3973    
cufflinks 5.69046 0.0 12.9139   Low
cufflinks 21.7617 0.0 48.5413   High

0 Strain