Gene : Eucgr.F04095 E. grandis v2.0
Defline:  (1 of 1) PTHR15856//PTHR15856:SF28 - PHD FINGER PROTEIN 20-RELATED Genomic Order:  3646
Name:  ? Eucgr.F04095 Secondary Identifier:  ? PAC:32054122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04095 0.5kb upstream 0.5kb upstream 3662 true Chr06: 51719363-51723024 Eucalyptus grandis
Eucgr.F04095 0.5kb upstream 0.5kb upstream 500 false Chr06: 51719363-51719862 Eucalyptus grandis
Eucgr.F04095 0.5kb downstream 0.5kb downstream 3662 true Chr06: 51719863-51723524 Eucalyptus grandis
Eucgr.F04095 0.5kb downstream 0.5kb downstream 500 false Chr06: 51723025-51723524 Eucalyptus grandis
Eucgr.F04095 1.0kb upstream 1.0kb upstream 4162 true Chr06: 51718863-51723024 Eucalyptus grandis
Eucgr.F04095 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51718863-51719862 Eucalyptus grandis
Eucgr.F04095 1.0kb downstream 1.0kb downstream 4162 true Chr06: 51719863-51724024 Eucalyptus grandis
Eucgr.F04095 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51723025-51724024 Eucalyptus grandis
Eucgr.F04095 2.0kb upstream 2.0kb upstream 5162 true Chr06: 51717863-51723024 Eucalyptus grandis
Eucgr.F04095 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51717863-51719862 Eucalyptus grandis
Eucgr.F04095 2.0kb downstream 2.0kb downstream 5162 true Chr06: 51719863-51725024 Eucalyptus grandis
Eucgr.F04095 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51723025-51725024 Eucalyptus grandis
Eucgr.F04095 5.0kb upstream 5.0kb upstream 8162 true Chr06: 51714863-51723024 Eucalyptus grandis
Eucgr.F04095 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51714863-51719862 Eucalyptus grandis
Eucgr.F04095 5.0kb downstream 5.0kb downstream 8162 true Chr06: 51719863-51728024 Eucalyptus grandis
Eucgr.F04095 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51723025-51728024 Eucalyptus grandis
Eucgr.F04095 10.0kb upstream 10.0kb upstream 13162 true Chr06: 51709863-51723024 Eucalyptus grandis
Eucgr.F04095 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51709863-51719862 Eucalyptus grandis
Eucgr.F04095 10.0kb downstream 10.0kb downstream 13162 true Chr06: 51719863-51733024 Eucalyptus grandis
Eucgr.F04095 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51723025-51733024 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069901 5270 Rosid View MSA
123741706 5271 Pentapetalae View MSA
122793317 5272 Eudicot View MSA
122047427 5273 Angiosperm View MSA
121310739 5274 Embryophyte View MSA
123348151 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.96619 0.0 7.74929   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.49596 0.0 6.84517    
cufflinks 0.287569 0.0 2.19997 Low  
cufflinks 0.209863 0.0 1.43264 Low  
cufflinks 0.292667 0.0 2.38307 Low  

0 Strain