Gene : Eucgr.F03923 E. grandis v2.0
Defline:  (1 of 1) PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Genomic Order:  3484
Name:  ? Eucgr.F03923 Secondary Identifier:  ? PAC:32056980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03923 0.5kb upstream 0.5kb upstream 8744 true Chr06: 50078781-50087524 Eucalyptus grandis
Eucgr.F03923 0.5kb upstream 0.5kb upstream 500 false Chr06: 50087025-50087524 Eucalyptus grandis
Eucgr.F03923 0.5kb downstream 0.5kb downstream 8744 true Chr06: 50078281-50087024 Eucalyptus grandis
Eucgr.F03923 0.5kb downstream 0.5kb downstream 500 false Chr06: 50078281-50078780 Eucalyptus grandis
Eucgr.F03923 1.0kb upstream 1.0kb upstream 9244 true Chr06: 50078781-50088024 Eucalyptus grandis
Eucgr.F03923 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50087025-50088024 Eucalyptus grandis
Eucgr.F03923 1.0kb downstream 1.0kb downstream 9244 true Chr06: 50077781-50087024 Eucalyptus grandis
Eucgr.F03923 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50077781-50078780 Eucalyptus grandis
Eucgr.F03923 2.0kb upstream 2.0kb upstream 10244 true Chr06: 50078781-50089024 Eucalyptus grandis
Eucgr.F03923 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50087025-50089024 Eucalyptus grandis
Eucgr.F03923 2.0kb downstream 2.0kb downstream 10244 true Chr06: 50076781-50087024 Eucalyptus grandis
Eucgr.F03923 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50076781-50078780 Eucalyptus grandis
Eucgr.F03923 5.0kb upstream 5.0kb upstream 13244 true Chr06: 50078781-50092024 Eucalyptus grandis
Eucgr.F03923 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50087025-50092024 Eucalyptus grandis
Eucgr.F03923 5.0kb downstream 5.0kb downstream 13244 true Chr06: 50073781-50087024 Eucalyptus grandis
Eucgr.F03923 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50073781-50078780 Eucalyptus grandis
Eucgr.F03923 10.0kb upstream 10.0kb upstream 18244 true Chr06: 50078781-50097024 Eucalyptus grandis
Eucgr.F03923 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50087025-50097024 Eucalyptus grandis
Eucgr.F03923 10.0kb downstream 10.0kb downstream 18244 true Chr06: 50068781-50087024 Eucalyptus grandis
Eucgr.F03923 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50068781-50078780 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063339 5270 Rosid View MSA
123747741 5271 Pentapetalae View MSA
122790823 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.4698 0.0 139.365 High  
cufflinks 51.7892 0.0 138.273 High  
cufflinks 56.4613 0.0 178.685 High High
cufflinks 39.6052 0.0 116.887 High Low
cufflinks 48.738 0.0 128.824 High  
cufflinks 41.5046 0.0 95.6436 High Low

0 Strain