Gene : Eucgr.F03831 E. grandis v2.0
Defline:  (1 of 33) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  3412
Name:  ? Eucgr.F03831 Secondary Identifier:  ? PAC:32054103
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03831 0.5kb upstream 0.5kb upstream 1900 true Chr06: 49067367-49069266 Eucalyptus grandis
Eucgr.F03831 0.5kb upstream 0.5kb upstream 500 false Chr06: 49068767-49069266 Eucalyptus grandis
Eucgr.F03831 0.5kb downstream 0.5kb downstream 1900 true Chr06: 49066867-49068766 Eucalyptus grandis
Eucgr.F03831 0.5kb downstream 0.5kb downstream 500 false Chr06: 49066867-49067366 Eucalyptus grandis
Eucgr.F03831 1.0kb upstream 1.0kb upstream 2400 true Chr06: 49067367-49069766 Eucalyptus grandis
Eucgr.F03831 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49068767-49069766 Eucalyptus grandis
Eucgr.F03831 1.0kb downstream 1.0kb downstream 2400 true Chr06: 49066367-49068766 Eucalyptus grandis
Eucgr.F03831 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49066367-49067366 Eucalyptus grandis
Eucgr.F03831 2.0kb upstream 2.0kb upstream 3400 true Chr06: 49067367-49070766 Eucalyptus grandis
Eucgr.F03831 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49068767-49070766 Eucalyptus grandis
Eucgr.F03831 2.0kb downstream 2.0kb downstream 3400 true Chr06: 49065367-49068766 Eucalyptus grandis
Eucgr.F03831 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49065367-49067366 Eucalyptus grandis
Eucgr.F03831 5.0kb upstream 5.0kb upstream 6400 true Chr06: 49067367-49073766 Eucalyptus grandis
Eucgr.F03831 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49068767-49073766 Eucalyptus grandis
Eucgr.F03831 5.0kb downstream 5.0kb downstream 6400 true Chr06: 49062367-49068766 Eucalyptus grandis
Eucgr.F03831 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49062367-49067366 Eucalyptus grandis
Eucgr.F03831 10.0kb upstream 10.0kb upstream 11400 true Chr06: 49067367-49078766 Eucalyptus grandis
Eucgr.F03831 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49068767-49078766 Eucalyptus grandis
Eucgr.F03831 10.0kb downstream 10.0kb downstream 11400 true Chr06: 49057367-49068766 Eucalyptus grandis
Eucgr.F03831 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49057367-49067366 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066699 5270 Rosid View MSA
123739132 5271 Pentapetalae View MSA
122788969 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.71376 0.0 4.72187    
cufflinks 0.80226 0.0 2.37409 Low Low
cufflinks 3.7442 0.0 9.50828    
cufflinks 1.57197 0.0 4.3216    
cufflinks 2.58241 0.0 6.80539    
cufflinks 4.2227 0.0 10.7126   High

0 Strain