Gene : Eucgr.F03800 E. grandis v2.0
Defline:  (1 of 2) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  3389
Name:  ? Eucgr.F03800 Secondary Identifier:  ? PAC:32056313
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2724 Eucalyptus grandis pathologic  
Egrandis PWY-6054 Eucalyptus grandis pathologic  
Egrandis PWY66-21 Eucalyptus grandis pathologic  
Egrandis PWY66-389 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03800 0.5kb upstream 0.5kb upstream 6963 true Chr06: 48718279-48725241 Eucalyptus grandis
Eucgr.F03800 0.5kb upstream 0.5kb upstream 500 false Chr06: 48718279-48718778 Eucalyptus grandis
Eucgr.F03800 0.5kb downstream 0.5kb downstream 6963 true Chr06: 48718779-48725741 Eucalyptus grandis
Eucgr.F03800 0.5kb downstream 0.5kb downstream 500 false Chr06: 48725242-48725741 Eucalyptus grandis
Eucgr.F03800 1.0kb upstream 1.0kb upstream 7463 true Chr06: 48717779-48725241 Eucalyptus grandis
Eucgr.F03800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48717779-48718778 Eucalyptus grandis
Eucgr.F03800 1.0kb downstream 1.0kb downstream 7463 true Chr06: 48718779-48726241 Eucalyptus grandis
Eucgr.F03800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48725242-48726241 Eucalyptus grandis
Eucgr.F03800 2.0kb upstream 2.0kb upstream 8463 true Chr06: 48716779-48725241 Eucalyptus grandis
Eucgr.F03800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48716779-48718778 Eucalyptus grandis
Eucgr.F03800 2.0kb downstream 2.0kb downstream 8463 true Chr06: 48718779-48727241 Eucalyptus grandis
Eucgr.F03800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48725242-48727241 Eucalyptus grandis
Eucgr.F03800 5.0kb upstream 5.0kb upstream 11463 true Chr06: 48713779-48725241 Eucalyptus grandis
Eucgr.F03800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48713779-48718778 Eucalyptus grandis
Eucgr.F03800 5.0kb downstream 5.0kb downstream 11463 true Chr06: 48718779-48730241 Eucalyptus grandis
Eucgr.F03800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48725242-48730241 Eucalyptus grandis
Eucgr.F03800 10.0kb upstream 10.0kb upstream 16463 true Chr06: 48708779-48725241 Eucalyptus grandis
Eucgr.F03800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48708779-48718778 Eucalyptus grandis
Eucgr.F03800 10.0kb downstream 10.0kb downstream 16463 true Chr06: 48718779-48735241 Eucalyptus grandis
Eucgr.F03800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48725242-48735241 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.73712 0.0 17.8853   Low
cufflinks 23.2334 0.0 52.2307   High
cufflinks 8.408 0.0 23.4145   Low
cufflinks 22.404 0.0 50.2641   High
cufflinks 15.6912 0.0 35.4866    
cufflinks 12.8 0.0 29.6097    

0 Strain