Gene : Eucgr.H00909 E. grandis v2.0
Defline:  (1 of 58) 3.1.1.11 - Pectinesterase / Pectin methylesterase Genomic Order:  479
Name:  ? Eucgr.H00909 Secondary Identifier:  ? PAC:32057541
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00909 0.5kb upstream 0.5kb upstream 3590 true Chr06: 7401740-7405329 Eucalyptus grandis
Eucgr.H00909 0.5kb upstream 0.5kb upstream 500 false Chr06: 7401740-7402239 Eucalyptus grandis
Eucgr.H00909 0.5kb downstream 0.5kb downstream 3590 true Chr06: 7402240-7405829 Eucalyptus grandis
Eucgr.H00909 0.5kb downstream 0.5kb downstream 500 false Chr06: 7405330-7405829 Eucalyptus grandis
Eucgr.H00909 1.0kb upstream 1.0kb upstream 4090 true Chr06: 7401240-7405329 Eucalyptus grandis
Eucgr.H00909 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7401240-7402239 Eucalyptus grandis
Eucgr.H00909 1.0kb downstream 1.0kb downstream 4090 true Chr06: 7402240-7406329 Eucalyptus grandis
Eucgr.H00909 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7405330-7406329 Eucalyptus grandis
Eucgr.H00909 2.0kb upstream 2.0kb upstream 5090 true Chr06: 7400240-7405329 Eucalyptus grandis
Eucgr.H00909 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7400240-7402239 Eucalyptus grandis
Eucgr.H00909 2.0kb downstream 2.0kb downstream 5090 true Chr06: 7402240-7407329 Eucalyptus grandis
Eucgr.H00909 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7405330-7407329 Eucalyptus grandis
Eucgr.H00909 5.0kb upstream 5.0kb upstream 8090 true Chr06: 7397240-7405329 Eucalyptus grandis
Eucgr.H00909 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7397240-7402239 Eucalyptus grandis
Eucgr.H00909 5.0kb downstream 5.0kb downstream 8090 true Chr06: 7402240-7410329 Eucalyptus grandis
Eucgr.H00909 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7405330-7410329 Eucalyptus grandis
Eucgr.H00909 10.0kb upstream 10.0kb upstream 13090 true Chr06: 7392240-7405329 Eucalyptus grandis
Eucgr.H00909 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7392240-7402239 Eucalyptus grandis
Eucgr.H00909 10.0kb downstream 10.0kb downstream 13090 true Chr06: 7402240-7415329 Eucalyptus grandis
Eucgr.H00909 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7405330-7415329 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071464 5270 Rosid View MSA
123744111 5271 Pentapetalae View MSA
122794965 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.98241 0.0 12.0824    
cufflinks 69.6897 0.0 178.312 High High
cufflinks 3.07261 0.0 10.3256    
cufflinks 4.78532 0.0 14.7594    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.90673 0.0 12.7547    

0 Strain