Gene : Eucgr.F04488 E. grandis v2.0
Defline:  (1 of 1) PTHR11384:SF3 - INNER MEMBRANE ABC TRANSPORTER ATP-BINDING PROTEIN YDDA-RELATED Genomic Order:  4051
Name:  ? Eucgr.F04488 Secondary Identifier:  ? PAC:32054739
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04488 0.5kb upstream 0.5kb upstream 6614 true Chr06: 57363978-57370591 Eucalyptus grandis
Eucgr.F04488 0.5kb upstream 0.5kb upstream 500 false Chr06: 57370092-57370591 Eucalyptus grandis
Eucgr.F04488 0.5kb downstream 0.5kb downstream 6614 true Chr06: 57363478-57370091 Eucalyptus grandis
Eucgr.F04488 0.5kb downstream 0.5kb downstream 500 false Chr06: 57363478-57363977 Eucalyptus grandis
Eucgr.F04488 1.0kb upstream 1.0kb upstream 7114 true Chr06: 57363978-57371091 Eucalyptus grandis
Eucgr.F04488 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57370092-57371091 Eucalyptus grandis
Eucgr.F04488 1.0kb downstream 1.0kb downstream 7114 true Chr06: 57362978-57370091 Eucalyptus grandis
Eucgr.F04488 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57362978-57363977 Eucalyptus grandis
Eucgr.F04488 2.0kb upstream 2.0kb upstream 8114 true Chr06: 57363978-57372091 Eucalyptus grandis
Eucgr.F04488 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57370092-57372091 Eucalyptus grandis
Eucgr.F04488 2.0kb downstream 2.0kb downstream 8114 true Chr06: 57361978-57370091 Eucalyptus grandis
Eucgr.F04488 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57361978-57363977 Eucalyptus grandis
Eucgr.F04488 5.0kb upstream 5.0kb upstream 11114 true Chr06: 57363978-57375091 Eucalyptus grandis
Eucgr.F04488 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57370092-57375091 Eucalyptus grandis
Eucgr.F04488 5.0kb downstream 5.0kb downstream 11114 true Chr06: 57358978-57370091 Eucalyptus grandis
Eucgr.F04488 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57358978-57363977 Eucalyptus grandis
Eucgr.F04488 10.0kb upstream 10.0kb upstream 16114 true Chr06: 57363978-57380091 Eucalyptus grandis
Eucgr.F04488 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57370092-57380091 Eucalyptus grandis
Eucgr.F04488 10.0kb downstream 10.0kb downstream 16114 true Chr06: 57353978-57370091 Eucalyptus grandis
Eucgr.F04488 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57353978-57363977 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064537 5270 Rosid View MSA
123737763 5271 Pentapetalae View MSA
122786409 5272 Eudicot View MSA
122041976 5273 Angiosperm View MSA
121349377 5274 Embryophyte View MSA
123427476 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.93479 0.0 9.74822    
cufflinks 2.23584 0.0 5.82086    
cufflinks 3.82348 0.0 9.47702    
cufflinks 2.70471 0.0 6.92123    
cufflinks 5.03431 0.0 12.1331    
cufflinks 22.3618 0.0 49.5206   High

0 Strain